Catalina Vallejos @CataVallejosM
Reader and group leader @mrc_hgu @EdinburghUni and @turinginst Fellow. Working between Bayes and biomedicine. Opinions my own. vallejosgroup.github.io Edinburgh, Scotland Joined May 2015-
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Back to @warwickstats (for the day!) after nearly 10 years!
As of yesterday, I am officially a dual British 🇬🇧and Chilean 🇨🇱citizen (a “new Scot” 🏴according to East Dunbartonshire council). Celebrated with a curry-night take away 😎
Applications are now open to join our new UKRI AI Centre for Doctoral Training in Biomedical Innovation for September 2024 entry. All the information you need to apply is ➡️ ai4biomed.io @UKRI_News @AI4BI_CDT
Hola! Les aviso que la convocatoria para las @sangerinstitute International Fellowships ya está abierta! 🗓️ Hasta el 19 de abril 💷 £100,000 por hasta 5 años 🧑🏽💻 Súper flexible 🌎 Latinoamérica elegible! Más info ⬇️ sanger.wd3.myworkdayjobs.com/en-US/Wellcome…
Thanks for the invite, forward to it!
I have decided to transition the @scRNAtools database to a low-maintenance mode starting in May. You can read more about this decision in this blog post lazappi.id.au/posts/2024-03-… but short story is that I can no longer dedicate time to actively maintaining it.
I have decided to transition the @scRNAtools database to a low-maintenance mode starting in May. You can read more about this decision in this blog post lazappi.id.au/posts/2024-03-… but short story is that I can no longer dedicate time to actively maintaining it.
All models are wrong and yours are useless! In case you missed my talk yesterday on how to make clinical prediction tools useful for patients, you can read all about it here. Enjoy! doi.org/10.1038/s41698…
🍺🍷🥂🥃🍸🍹🍾🥴 Pre-print alert! @elenabernabio finds that a blood-based DNAm EpiScore (trained in over 16,000 volunteers from @genscot) correlates ~0.4-0.5 with self-reported alcohol consumption in four external cohorts. medrxiv.org/content/10.110…
Is my model useless? Getting ready to debate @markowetzlab with @cwcyau #CRUKdataconf24
Is there an optimal way to pre-filter CpGs prior to training DNAm predictors of disease? Check out Yipeng's latest preprint, which presents our RTFS approach applied to type 2 diabetes data from @genscot and the KORA study. medrxiv.org/content/10.110…
We have secured @BBSRC funding for @EdDaSH_Training to deliver more workshops... They're happening really soon and places fill quickly! Sign up here! forms.office.com/e/zwE6byEtJR 1) HD Statistics in R, Feb 27 - March 1 2) HD Statistics in R, Mar 19 - 22 3) ML in Python, Mar 26 - 29
This awesome PhD opportunity is open until 26th February. Single cells, ageing, mutations and most importantly - T cells!! If you've ever wondered how ageing-associated somatic mutations affect immune function - then lets find out together!
This awesome PhD opportunity is open until 26th February. Single cells, ageing, mutations and most importantly - T cells!! If you've ever wondered how ageing-associated somatic mutations affect immune function - then lets find out together!
Go and do an exciting interdisciplinary maths PhD with Lyndsay. Having worked with her for years, she will be an excellent mentor.
Go and do an exciting interdisciplinary maths PhD with Lyndsay. Having worked with her for years, she will be an excellent mentor.
@IBDNathan delivering his pre-viva seminar this morning @EdinUni_IGC “Characterising disease heterogeneity in IBD via longitudinal biomarkers” It has been a huge privilege to co-supervise Nathan with @CataVallejosM Good luck today Nathan. We are both incredibly proud of you.…
I'd be delighted to sponsor a @MEResearchUK and @DaphneJacksonTr #MEcfs Fellowship in @EdinburghUni (closing data 4 March 2024). Please get in touch
Somehow I agreed to debate against @markowetzlab …
Somehow I agreed to debate against @markowetzlab …
Fabian Theis @fabian_theis
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18K Followers 5K Following I'm not on twitter anymore, find my on Bluesky or MastodonEwan Birney @ewanbirney
50K Followers 2K Following Deputy Director General of EMBL, Director of EMBL-EBI. I have an insatiable love of biology. @[email protected]. I also work with ONT, Dovetail + GeL.𝕐 (@[email protected].. @nomad421
8K Followers 939 Following Associate Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own.Shila Ghazanfar @shazanfar
3K Followers 1K Following Statistics PhD. Group Leader. DECRA @arc_gov_au @Sydney_Uni. Postdoc @RoyalSociety @CRUK_CI @emblebi #bioinformatics #rstats #spatialomicsDavis McCarthy @davisjmcc
4K Followers 1K Following Head, Bioinformatics and Cellular Genomics Lab, @SVIResearch + @MelbIntGen. Stats, ML, bioinformatics, genomics, single-cell. Mastodon: @[email protected]Matt Ritchie @mritchieau
3K Followers 2K Following Everything is R-some #rstats #bioconductor #genomics #singlecell #bioinformaticsAnne Carpenter, PhD @DrAnneCarpenter
21K Followers 2K Following Discovery in images. Enthralled by science. 5 kids. She. SAB Recursion, Quiver. Founder SyzOnc. https://t.co/CQCHnSAc9MAlicia Oshlack @AliciaOshlack
9K Followers 1K Following Bioinformatics, computational biology, genomics, Women in ScienceMichael Schatz @mike_schatz
16K Followers 1K Following Bloomberg Distinguished Professor of Computer Science and Biology at Johns Hopkins UniversityMichael Hoffman @mich.. @michaelhoffman
23K Followers 7K Following Chair, Comp Bio & Medicine Program, Princess Margaret Cancer Centre. Assoc Prof, Med Biophysics & Comp Sci, University of Toronto. COI https://t.co/CvupKNIjZrDuncan Sproul @sproul_lab
3K Followers 5K Following Research group leader @mrc_hgu @EdinburghUni interdisciplinary research on disease #epigenetics. Part-time solo dad. Occasional music and climbing.Saez-Rodriguez Group @saezlab
5K Followers 628 Following Account of the Saez-Rodriguez lab at Heidelberg University Lab members tweet about our news, activities & publicationsLiver Growth and Canc.. @boulter_lab
2K Followers 2K Following Cancer Research UK funded group @MRC_HGU: liver cancer, signalling, lifting, ductular development and repair, gene editing and diversity in STEM.Simone Tiberi @tiberi_simone
476 Followers 318 Following 🇮🇹 Assistant Professor, Dept of Statistics, University of Bologna Statistician developing methods in Computational Biology (Bioinformatics & Systems Biology)Christopher Yau @cwcyau
4K Followers 3K Following Senior Research Fellow, University of Oxford. Turing AI Fellow and Director, HDRUK-Turing Wellcome PhD Programme in Health Data Science.Charlie Lees @charlie_lees
18K Followers 3K Following I write about inflammatory bowel disease providing inspiration, education and deep community. I am Professor of Gastroenterology and UKRIFLF. I also run a lot.Martin Reijns 💙�.. @MartinReijns
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9K Followers 2K Following Associate Prof @JHUBME @jhubiostat, mom, she/her, Co-founder @RLadiesBmore. #Biomedical #DataScience #Genomics #Imaging #rstats #pythoneduardo farias @eduardofar85808
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119 Followers 512 Following • Celebrating Diversity • @RoyalStatSoc Special Interest Group • Views expressed are our own and do not necessarily represent those of the RSS •David A Jenkins @David_A_Jenkins
342 Followers 388 Following Lecturer in Health Data Science at the University of ManchesterMatt Sydes @mattsydes
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106 Followers 196 Following Senior Research Fellow - Senior Data Manager @UCL_BSH @CanTest_PC. Researching early diagnosis of cancer. Data/ geography/ mountains/ salsaEliana Vasquez O 🇨.. @elivaos
566 Followers 295 Following #Radiotherapy researcher at @Rt_physics, University of Manchester.Ashley Akbari @AshleyAkbari
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6K Followers 4K Following Outnumbered 3:1 by ladies 🏠 at work 👨🏼⚕️ lead palliative medicine @uhsussex & @macmillancancer national advisor , research #survonc #pallonc #fatigue #hpmLuna @Tulip575248
7 Followers 796 Followingbbw big ass fuck okay @CemBey50500
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800 Followers 4K Following 2nd year GI Fellow @Northwellhealth via @BIDMC_IM @harvardmed (RT/likes ≠ endorsement)Devin Bendixsen, PhD @DevinBendixsen
161 Followers 305 Following Staff Bioinformatician | University of Edinburgh | MRC Human Genetics | Institute of Genetics and Cancer | Bioinformatics | Cancer GenomicsAriel Madrigal @arielmadr
312 Followers 883 Following PhD student of Human Genetics at McGill. Studied genomics at LCG UNAM. Single cell, statistics, cancer.Xiao Fu @XiaoFu90
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349 Followers 228 Following Bioinformatics group leader at the Roslin Institute, University of EdinburghY-ECCO @Y_ECCO_IBD
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25K Followers 2K Following We're here to support our broad cancer research community of 4,000 scientists and clinicians. For general Cancer Research UK news & fundraising follow @CR_UKcatamirez @catamirez74
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95 Followers 305 Following Postdoc at @mrc_hgu. Interested in the effects of air pollution and environmental exposure on DNA methylation with too many hobbies to list.Stella Derrick @StellafgDerrick
29 Followers 869 Following Gathered on the site of girls from all US states 😳 They are ready to meet Some have naked profile photos! Watching this https://t.co/cIzmcEgzbzFrancesca Ieva @FraIev84
72 Followers 91 Following Associate Professor of Statistics at @polimi Associate Head of the Health Data Science Center at @humantechnopoleJournal of Clinical G.. @clincgenetics
690 Followers 5K Followingandrea_cappozzo @AndreaCappozzo
467 Followers 1K Following Assistant Professor of Statistics at University of Milan @LaStatale, Doctor Europaeus 🇪🇺Roma @RomaPuro
98 Followers 920 Following Biostatistician. Research interests: multimorbidity patterns, adverse drug reactions.Baker Lab @bakergroupcvs
439 Followers 231 Following Translational cardiovascular research group in @EdinUniCVS | We are interested in vascular damage, repair, and cell/gene/RNA-based therapies.Alaa Alahmadi @Dr_AlaaAlahmadi
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488 Followers 922 Following PhD candidate @GarvanInstitute | Ballouz Lab | X chromosome and autoimmune disease | Co-host of @ResBytesPodcast | I work and live on Gadigal land.Andrew Habib @_ahabib_
133 Followers 2K Following Researcher interested in SE, PL, ML4SE, SE4ML, ..., etc. https://t.co/tZj0Fi4M5OAlicia @AliciaGill26
4 Followers 35 FollowingMartín de Muniategui.. @MdeMuniategui
54 Followers 289 Following Biostatistician 🧬🧑🏻💻📊💻🏳️🌈 | He/HimVitalii Kleshchevniko.. @vitaliikl
2K Followers 1K Following Researcher @bayraktar_lab @StatGenomics @teichlab @sangerinstitute | Physics & AI to study cells, cell circuits & brains 🧠 | #SingleCell+spatial | 🌍🇺🇦to🇬🇧Ricardo Valencia Albo.. @rvalenciaaz
306 Followers 2K Following Towards an automated biochemist. PhD student @SBSatED @EdinburghUni. @soreearskid and @doyarzunrod Labs. Funding @DarwinTrustOfEd. Choir conductor (in training)Carlos Talavera-Lópe.. @cartalop
1K Followers 422 Following Junior professor @Uni_WUE @Wue_SI | Immune cellular collectives | PhD @karolinskainst | Postdoc @TheCrick @sangerinstitute @emblebi @teichlab | 🇳🇮🇸🇪🇬🇧🇩🇪Neda Shokraneh @neda_shokraneh
1 Followers 34 FollowingPrakash Ramachandran @prakramacha
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22K Followers 2K Following Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU). Post: @anshulkundaje, Threads: anshulkundajeWolfgang Huber 🇺�.. @wolfgangkhuber
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13K Followers 164 FollowingEwan Birney @ewanbirney
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8K Followers 939 Following Associate Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own.Shila Ghazanfar @shazanfar
3K Followers 1K Following Statistics PhD. Group Leader. DECRA @arc_gov_au @Sydney_Uni. Postdoc @RoyalSociety @CRUK_CI @emblebi #bioinformatics #rstats #spatialomicsDavis McCarthy @davisjmcc
4K Followers 1K Following Head, Bioinformatics and Cellular Genomics Lab, @SVIResearch + @MelbIntGen. Stats, ML, bioinformatics, genomics, single-cell. Mastodon: @[email protected]Matt Ritchie @mritchieau
3K Followers 2K Following Everything is R-some #rstats #bioconductor #genomics #singlecell #bioinformaticsArjun Raj @arjunrajlab
25K Followers 2K Following Just another LLM. Tweets do not necessarily reflect the views of people in my lab or even my own views last week. https://t.co/fZAnUCqd12Anne Carpenter, PhD @DrAnneCarpenter
21K Followers 2K Following Discovery in images. Enthralled by science. 5 kids. She. SAB Recursion, Quiver. Founder SyzOnc. https://t.co/CQCHnSAc9MAlicia Oshlack @AliciaOshlack
9K Followers 1K Following Bioinformatics, computational biology, genomics, Women in ScienceDaniela Witten @daniela_witten
49K Followers 754 Following dorothy gilford endowed chair and prof of stat/biostat @uw. all views my own.Michael Schatz @mike_schatz
16K Followers 1K Following Bloomberg Distinguished Professor of Computer Science and Biology at Johns Hopkins UniversityMichael Hoffman @mich.. @michaelhoffman
23K Followers 7K Following Chair, Comp Bio & Medicine Program, Princess Margaret Cancer Centre. Assoc Prof, Med Biophysics & Comp Sci, University of Toronto. COI https://t.co/CvupKNIjZrDuncan Sproul @sproul_lab
3K Followers 5K Following Research group leader @mrc_hgu @EdinburghUni interdisciplinary research on disease #epigenetics. Part-time solo dad. Occasional music and climbing.Wendy Bickmore @wendy_bickmore
6K Followers 86 Following Director of MRC Human Genetics Unit @mrc_hgu @EdinUniv_IGC - but tweeting in my own capacity. Supporter of fundamental science. Airedale terrier owner.Rahul Satija @satijalab
28K Followers 380 Following Core Member, New York Genome Center; Associate Professor, Biology, NYULara Spieker @lara_crc
3K Followers 5K Following Editor for #Statistics and #DataScience books at Chapman & Hall/CRC Press @CRC_MathStats. The usual caveats apply, views are my own.PREDICT IBD @PREDICTIBD
1K Followers 178 Following National Center of Excellence for the Molecular Prediction of Inflammatory Bowel Disease headed by Professor @DrTineJessTine Jess @DrTineJess
753 Followers 150 Following Director, National Center of Excellence @PREDICTIBD. Professor DMSc, @aausund. Fellow, Royal Danish Academy @VSelskab. Chief Physician, @AalborgUH.Aleksejs Sazonovs @alehins
902 Followers 4K Following IBD genomics @PREDICTIBD. Previously: @sangerinstitute @cambridge_uni and @univofstandrews. Views expressed in different tissuesAziz Sheikh @DrAzizSheikh
3K Followers 1K Following Professor @EdinburghUni | Director @EdinUniUsher @AUKCARProf Catherine Ross @catherinemross
3K Followers 2K Following Chief Scientific Officer Scottish Government, Visiting Professor @EdinburghNapier @ManMetUni, Secretary/Treasurer ACNAP @escardio, Vice-Chair @Science_CouncilDorien Kimenai @DorienKimenai
191 Followers 340 Following BHF Intermediate Research Fellow, University of Edinburgh. CVD | Health equity | Preventative medicine | Biomarkers | Epidemiology | ❤️ RunningRose McHardy @RoseMcHardy
136 Followers 183 Following PhD student at University of Strathclyde Data Scientist at DxcoverDavid A Jenkins @David_A_Jenkins
342 Followers 388 Following Lecturer in Health Data Science at the University of Manchester@useMYdata @useMYdata
2K Followers 728 Following The only independent UK movement of patients, relatives and carers focussed on the use of patient data to save lives and improve outcomesMatt Sydes @mattsydes
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4K Followers 3K Following Senior Research Fellow, University of Oxford. Turing AI Fellow and Director, HDRUK-Turing Wellcome PhD Programme in Health Data Science.Andrea ganna @andganna
3K Followers 606 Following Associate Prof in health data science @HiLIFE_helsinki @FIMM_UH - MGH/Harvard - Playing with all kind of data - https://t.co/BffgAbQTlsmedRxiv @medrxivpreprint
18K Followers 0 Following The non-profit preprint server for the health sciencesUKRI Healthy Ageing C.. @HealthyAgeingUK
1K Followers 228 Following Delivered by Innovate UK and ESRC, our aim is to help people remain as active, productive, independent and socially connected for as long as possible.Chris Lamb @DrChrisLamb
2K Followers 660 Following Clinician Scientist @UniofNewcastle | Gastroenterologist @NewcastleHosps | IBD immunology, gut microbiota & therapeutics | Chief Investigator @IBDResponsePeter Hall @PeterHall001
838 Followers 658 Following Oncologist interested in Data Science, Health Economics and methods for outcome measurement. Seeking data opportunities. https://t.co/M77XZ7X7Z9Cell Onion @Cell_Onion
9K Followers 1 Following Science so improbable it must be satire. EIC: Dunning Kruger; Assoc Editors: Reese Entgrad, Gnu Karsmel, Stuhl Sofner Follow Cell_Onion on Bluesky!NEJM AI @NEJM_AI
11K Followers 312 Following NEJM AI is a new journal on medical artificial intelligence and machine learning from NEJM Group, the publisher of @NEJM.NEJM @NEJM
942K Followers 436 Following The New England Journal of Medicine is the world’s leading medical journal and website.Stein Aerts @steinaerts
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5K Followers 3K Following Professor Humboldt University of Berlin @MDC_Berlin @BIMSB_MDC @LabPomboScience and Innovatio.. @CRUKresearch
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1K Followers 868 Following Lecturer • @UCYofficial • @ImperialX_AI • @ForbesUnder30 • Previously @UniofOxford • @Cambridge_uni • @google • @turinginstHealth Data Science C.. @HT_HDSC
161 Followers 155 Following A joint partnership between @PoliMi and @humantechnopole, the HDSC will help deliver a step-change in health data science in Italy.Emanuele @Di_Angelantonio
476 Followers 201 Following Clinician scientist, Professor @Cambridge_uni, Director @DonorHealthBTRU, @CAMBRIDGE_CEU, Director Health Data Science @humantechnopoleFrancesca Ieva @FraIev84
72 Followers 91 Following Associate Professor of Statistics at @polimi Associate Head of the Health Data Science Center at @humantechnopoleCarlos Talavera-Lópe.. @cartalop
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113 Followers 345 FollowingRebecca Berrens @RBerrens
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4K Followers 2K Following Computational virology research group exploring virus evolution, virus-host interactions & disease, in @CVRbioinfo, part of @CVRinfo. Tweets by @DavidLRobrtson.Glasgow Computational.. @glasgowcompbio
395 Followers 0 Following Community for everyone at the University of Glasgow who is interested in using computers to solve biology problems. We organise events to share cool research!Bubble childcare @bubbleChildcare
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158K Followers 1K Following Founder, Tax Policy Associates Ltd. Tax realist. More boring on LinkedIn https://t.co/Cm5n2PhqrDMark Girolami @TuringChiefSci
1K Followers 268 Following The Chief Scientist at @turinginst the UK’s national institute for data science and artificial intelligence. || [email protected]Prof Ewen Harrison @ewenharrison
9K Followers 4K Following Prof Surgery & Data Science. AI. Co-Head Centre for Medical Informatics @EdinUniUsher HPB Surgeon https://t.co/ufwF2g4Mct R4HDS author @GlobalSurg surgery networkBhramar Mukherjee @BhramarBioStat
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245 Followers 296 Following Immunologist. Marie Skłodowska-Curie Fellow. Working on Tuberculosis. (she/her).Leadership Sculptor G.. @LeadSculpt
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233 Followers 608 Following PhD student at @turinginst and @QMUL | Medical AI | Omics LondonLana Garmire 🌶 @GarmireGroup
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920 Followers 723 Following (he/him) Principal Investigator at @CeMM_News; Computational Biology of Aging and Pathology; [email protected]; [email protected]Melanie Glickman @MelanieGlickman
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58 Followers 44 Following Group Leader and Lecturer (Asst. Prof.) in Biomedical AI @EdinburghUni | Quantitative Biomedicine, #causalinference, #machinelearning | Views are my own.Larry the Cat @Number10cat
831K Followers 149 Following Chief Mouser to the Cabinet Office. 16 year old tabby. Living with my fifth Prime Minister. Unofficial.The TARDIS shed in Sc.. @TardisShed1
114 Followers 25 Following The TARDIS has landed in Scott’s garden in East Lothian. Enjoy garden photos and lots of sci-fi nonsense!One of the best feelings as a #PI -- making a github repo public before you preprint on @biorxivpreprint 🥳 #proudPI
Today is my first first day of work in over a decade. Thanks to everyone at @fulcrumgenomics for making it as painless and exciting as possible! I'm so happy to be joining the team 🎉
So happy and grateful for receiving this amazing news!! @nursing_studies @EdinUniHealth at @EdinburghUni Thank you!
It's baby names day! Luca is Scotland’s most popular boys’ name for the first time, overtaking last year’s number one Noah. Isla is back as in first place for girls names, with Olivia dropping to second place. Find the full list 👇 bit.ly/NRSBabiesNames
Many congratulations to Andrew @profadmorris from all at Generation Scotland!
We are pleased to announce Professor Andrew Morris CBE FRSE FMedSci as our new President from April. On his appointment, @profadmorris acknowledges the unique position the Academy has to "lead medical science into the future.” Read more: acmedsci.ac.uk/more/news/newp…
We're very excited to announce the next keynote speaker at @RSSAnnualConf 2024: @karlado! 🙌 We can't wait to hear more about her research in Biostatistics, machine learning and causal inference 🖥️🧪 📅 #RSS2024Conf Brighton from 2-5 September ow.ly/CKUG50QVO4R
1/🚀 Introducing an identifiability theory for latent variable models that compare patterns across datasets. Can we identify salient variation that is specific to a data set, and under which conditions? With wonderful collaborators @jchuetter, @EhsanHRA, @jkpritch, and Aviv Regev
I can highly recommend this. I attended back in 2015 and it jump-started my work as computational biologist.
Join us for CSAMA 2024 Biological Data Science summer school in Brixen/Bressanone 23-28 June. csama2024.bioconductor.eu Exciting line-up of lecturers incl. Davide Risso, Mike Love, Charlotte Soneson, Robert Gentleman, Vince Carey, Chiara Romualdi, Ilaria Billato
🚀 OHT has been out and about this week! 💖 Our co-founder and co-director @Maxi_Macki has been in Milan at Wired Health, speaking about health data diversity! Were you there? #OHT24 🎉
@stephaniehicks You rock!
@dralynch @idsai_uom For some reason due to the way the web link has worked he’s also the face of the meeting!
Honored to deliver a distinguished keynote at ISMB 2024! Join us in Montreal this July 12-16: iscb.org/ismb2024/progr…
To all budding compbio & ML folks interested in bio: Don't just only run behind the latest ML model hype train. The greatest long run impact will come by really assimilating prior bio/compbio literature with the goal of really understanding strategies for how to model biology. 1/
I'm excited to start a new position as Senior Data Scientist @Novartis in the team of @enricoferrero. Looking forward to new challenges within #Immunology #DataScience.
@cwcyau It’s all the fault of the supervisors really. You wouldn’t believe what I have seen. Some of them even use Gen AI to produce their slides for public debates.
👋 Attendees have arrived for our seminar with Jack Bowden (@jack_bowdenjack), Professor of Biomedical Data Science at @UniofExeter and Director at @novonordisk 👨🔬 Hui Guo, Reader in Biostatistics at @OfficialUoM kicks us off! 🚀
We just hit 10k new Generation Scotland volunteers! 🥳 In 2023, our volunteers contributed to research into depression, childhood trauma, diabetes, epigenetics, ethnic inequalities during the Covid-19 pandemic and morning sickness! Help us hit 20k: gen.scot 🧪
I’m at my @NHS_Lothian desk catching up on clinical admin ahead of ECCO and then a working holiday to California and Colorado. Lots of faecal calprotectin results. Lots of negative calpro results. This is very encouraging! We are super interested in longitudinal trends of…