Anshul Kundaje (anshulkundaje@bluesky) @anshulkundaje
Genomics, Machine Learning, Statistics, Big Data and Football (Soccer, GGMU). Post: @anshulkundaje, Threads: anshulkundaje anshul.kundaje.net Stanford, CA Joined July 2006-
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If you like gene regulation and want to join a stimulating international environment - with cutting edge facilities - top healthcare and family benefits. Join us for a post-doc @embl - funded by ERC embl.org/jobs/position/…
How to be as "smart" as Auto-Regressive LLMs: - memorize lots of problem statements together with recipes on how to solve them. - to solve a new problem, retrieve the recipe whose problem statement superficially matches the new problem. - apply the recipe blindly and declare…
How to be as "smart" as Auto-Regressive LLMs: - memorize lots of problem statements together with recipes on how to solve them. - to solve a new problem, retrieve the recipe whose problem statement superficially matches the new problem. - apply the recipe blindly and declare…
Introducing the Domainome... Site saturation mutagenesis of 500 human protein domains reveals the contribution of protein destabilization to genetic disease by @ToniBeltran13 @CRGenomica @sangerinstitute @BGI_Genomics biorxiv.org/content/10.110…
Great GWAS paper diving deep into the contributions of germline variants to kidney cancer in 29k cases and >800k controls. I particularly love the discovery of a VHL 3' UTR variant, seen in ~10% of African and ~0.01% of European ancestries, that increase the risk of clear cell…
@UCLA Jewish student trying to attend class is forcibly prevented entry by 6 masked Pro-Hamas students while UCLA guard stands by and DOES NOTHING. “I am a UCLA student…my class is over there. I want to use THAT entrance. Let me go in.” #AntizionismIsAntisemitism 🎥…
I always find it sadly ironic how quickly occupation protests manage to reinvent the concepts of policing, checkpoints, borders, and so on
I always find it sadly ironic how quickly occupation protests manage to reinvent the concepts of policing, checkpoints, borders, and so on
We built CZ #CellxGene to provide the community with curated, interoperable single-cell data. Today, the platform has 85M+ cells & tools like Census that are being used to train new analysis models. Proud to see @Nature highlight our work & collaborators nature.com/articles/d4158…
It pains me to see facile critiques of GWAS on here from our clinical/biostats friends while the many actually good reasons to be critical of GWAS get little attention. So here's a thread on what GWAS does, what critics get wrong, and where GWAS is genuinely still lacking. 🧵:
Very excited to share our new MPRA study on rare variants and cancer somatic mutations in the 3' UTR. Really proud of my former students @ting_fu_21 and @kofiamoah435 for spearheading this effort. Great collaboration with @srikosuri and team. nature.com/articles/s4146…
Missing cell types in single-cell references impact deconvolution of bulk data but are detectable @GreeneScientist biorxiv.org/content/10.110…
@arjunrajlab People use AI without thinking basic science is "intractable". To me interpretable AI models like ChromBPNet are like the microscope - they have their biases and don't automatically produce understanding, but are a new way of looking that fundamentally helps understand biology.
Thrilled to release 🌟STaRK 🌟 - A large-scale LLM retrieval benchmark on semi-structured knowledge bases. While LLMs excel at reasoning and semantic retrieval, they struggle with more complex tasks. Especially when real-world user queries require a combination of unstructured…
You have perturbed TFs (for example disease vs healthy) and genome-wide H3K27ac data, what TF activity tools would infer the perturbed TFs that are more likely to be validated? According to our results, the top 3 tools: RcisTarget, MEIRLOP and monaLisa biorxiv.org/content/10.110…
The shift towards translational science and AI seems to be a consequence of thinking that basic science problems are either solved or intractable, respectively. Perhaps that is true, or perhaps we are mortgaging our future. I honestly don’t know which.
We're hiring! Looking for a Life Sciences Technician II to help us acquire RNA structural data on 1 billion diverse molecules: careersearch.stanford.edu/jobs/life-scie…
Why use Gnomix, our new local ancestry algorithm for big data? 1. Fastest, works w/ biobank scale data & whole genomes 2. Highest resolution, can find small, ancient segments 3. Most accurate 4. Performs phase error correction (& quickly) 5. Easy to use github.com/AI-sandbox/gno…
Why use Gnomix, our new local ancestry algorithm for big data? 1. Fastest, works w/ biobank scale data & whole genomes 2. Highest resolution, can find small, ancient segments 3. Most accurate 4. Performs phase error correction (& quickly) 5. Easy to use github.com/AI-sandbox/gno… https://t.co/MFHdYRJHNS
Can we...just accept that we suck at this? I want to tell you a story that has made me kinda hopeless about Twitter's ability to affect positive things happening, and it starts with this tweet from Hillary Clinton. x.com/hillaryclinton…
Can we...just accept that we suck at this? I want to tell you a story that has made me kinda hopeless about Twitter's ability to affect positive things happening, and it starts with this tweet from Hillary Clinton. x.com/hillaryclinton…
I integrate and annotate 75 AML biopsies in part 2 of my 2024 single-cell guide. Custom label transfer, nuanced integration with hyperparameter tuning, avoiding pitfalls in analysis, etc. It's long, but one of my favorite videos so far. youtu.be/FqG_O12oWR4
AAV+Cas9 engineering leads to tandems/concatemers in 1/3 edited cells. Elegant and important paper with some practical solutions to the problem. Rehashing some prior work on this here 🧵 #Cas9 #ontargeteffects nature.com/articles/s4158…
Important update on metadata of H5N1 in cattle (and back to birds): Thanks to the extraordinary detective skills of @flodebarre, we are pleased to be able to share this table containing locations and dates for several H5N1 cases in cattle and birds: github.com/andersen-lab/a…
Fabian Theis @fabian_theis
29K Followers 446 Following Computational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
Lior Pachter @lpachter
44K Followers 2K Following Bren Professor of Computational Biology @caltech. Blog at https://t.co/FFQzhEsmhi. Tweets represent my views, not my employer's. #methodsmatter
Ming "Tommy" Tang @tangming2005
30K Followers 2K Following Director of computational biology. On my way to helping 1 million people learn bioinformatics. Educator, Biotech, single cell. Also talks about leadership.
Itai Yanai 💔 @ItaiYanai
24K Followers 2K Following Professor at the NYU School of Medicine. Co-host of the 'Night Science Podcast' https://t.co/Sy1rcWXGLz @nightsciencepod
Arjun Raj @arjunrajlab
25K Followers 2K Following Just another LLM. Tweets do not necessarily reflect the views of people in my lab or even my own views last week. https://t.co/fZAnUCqd12
Veera Rajagopal @doctorveera
17K Followers 4K Following MBBS, MD, PhD | GWAS storyteller | Scientist at Regeneron | Human genetics & drug discovery in Neuroscience & Psychiatry | He/Him
Manolis Kellis @manoliskellis
25K Followers 4K Following Dissecting disease mechanism. Single-cell, Epigenomics, Regulatory Genomics, Disease Genetics, Brain, Cancer, Metabolism. @MIT Prof, @MIT_CSAIL, @BroadInstitute
Michael Love @mikelove
18K Followers 5K Following I'm not on twitter anymore, find my on Bluesky or Mastodon
Kevin K. Yang 楊凱�.. @KevinKaichuang
16K Followers 5K Following Senior Researcher in BioML @MSFTResearch (@MSRNE). He/him/他. 🇹🇼
dana_peer @dana_peer
13K Followers 167 Following
Michael Hoffman @mich.. @michaelhoffman
23K Followers 7K Following Chair, Comp Bio & Medicine Program, Princess Margaret Cancer Centre. Assoc Prof, Med Biophysics & Comp Sci, University of Toronto. COI https://t.co/CvupKNIjZr
Jian Ma @jmuiuc
7K Followers 1K Following Ray and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science @CMUCompBio @SCSatCMU @CarnegieMellon
Anne Carpenter, PhD @DrAnneCarpenter
22K Followers 2K Following Discovery in images. Enthralled by science. 5 kids. She. SAB Recursion, Quiver. Founder SyzOnc. https://t.co/CQCHnSAc9M
Ewan Birney @ewanbirney
50K Followers 2K Following Deputy Director General of EMBL, Director of EMBL-EBI. I have an insatiable love of biology. @[email protected]. I also work with ONT, Dovetail + GeL.
Jacob Schreiber @jmschreiber91
5K Followers 1K Following Post-doc @StanfordMed, studying genomics, machine learning, and fruit. Editor @StanfordAILab Blog, @JOSS_TheOJ. My code is like our genomes: most of it is junk.
Dan Landau @landau_lab
9K Followers 2K Following Cancer genomics, epigenomics and evolutionary dynamics (Weill Cornell/New York Genome Center). Hemato-oncologist (NYP). Discl.: https://t.co/tAu87FMVW3
Aaron Quinlan @aaronquinlan
17K Followers 1K Following Genome mutation, software for genomic discovery. https://t.co/6GKjALLFfk Co-director, DELPHI Data Science Init.: https://t.co/8uWRcIzWRr
Patrick Hsu @pdhsu
30K Followers 3K Following co-founder @ArcInstitute, @BerkeleyBioE professor | researcher & investor in genome editing, biotech, AI | 🇨🇦 @harvard @broadinstitute @editasmed, Fast Grants
𝕐 (@[email protected].. @nomad421
8K Followers 938 Following Associate Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own.
Wolfgang Huber 🇺�.. @wolfgangkhuber
10K Followers 1K Following Scientist working on statistical methods and applications in biology. Find me at @wkhuber.bsky.social @[email protected] Слава Україні
Lida Kanari @LidaKanari
719 Followers 868 Following Topological Data Analysis and Computational Neuroscience. Group leader, Blue Brain Project, EPFL
Alex Westbrook @AleWestbrook
2 Followers 18 Following
keiver @keiver
2K Followers 3K Following building better personal health products for the future ⚕️ seldom linear
Canon Rick Sanchez -s.. @CanonRickSanchz
2 Followers 103 Following Scifi biotech founder by day, scifi tweeter by night
Nirai Goivndasamy @niraigovi
120 Followers 565 Following Science, technology and innovation enthusiast | Working towards bringing cultured meat to market 🐟🥩🍔
ssteevens @Steevens43
164 Followers 5K Following
二胖 @hexx126
5 Followers 57 Following
Vishal Oza @vishoza
372 Followers 783 Following Computational Biologist, UAB. I have interests in network analysis, omics, computational and systems biology. @[email protected]
Sheikh Abdul Rahman @drrahmansa007
146 Followers 550 Following Assistant Professor | CFAR Awardee | HIV Researcher | Singer | DMV Got Talent Winner | Proud Husband & Dad | Photographer | Views my own @EmoryUniversity
Nilesh @Nilesh1Fegade
29 Followers 361 Following
Dawei @Dawei88839077
3 Followers 41 Following
mohamed ali @mhmmd_aliiii
19 Followers 1K Following
alan as a swe @asasoftware
152 Followers 1K Following Python and machine learning enthusiast. Currently studying software engineering and exploring the latest memes in tech.
Avinash @Avinash41756572
43 Followers 339 Following Doctor by profession Looking for research opportunities/Externship/observership; ECFMG REGISTERED Great sense of humor
Christopher Carpenter @Christophe9033
37 Followers 21 Following
ANUBHAV CHATURVEDI @anubhavchaturvd
255 Followers 4K Following
Gabe Gomes @gabepgomes
6K Followers 6K Following digital molecular designer | Assistant Professor @CarnegieMellon with @gpggrp | cofounder, https://t.co/sXnQ7WfmGY | h(e/im), views my own
Debleena Guin @GuinDebleena
1 Followers 49 Following
Yufan A. Liu @YAndrewL1
37 Followers 290 Following
Supratik B @supratikb98
1 Followers 17 Following
Saiful Islam Shanto @_imsaifulislam
135 Followers 1K Following
kirsch @kirsch_wine
0 Followers 438 Following Postgraduate medical student of Huazhong University of Science and Technology
ke zhang @kezhang2021
31 Followers 147 Following
Mariam Ahmed @MariamAhme44357
7 Followers 269 Following Faculty of Science, Al-Azhar University, specializing in Microbiology
Maryam Enshaei @MaryamEnshaei
0 Followers 68 Following
Stefan Kertesz, MD, M.. @StefanKertesz
15K Followers 9K Following Physician/research in primary care, homelessness, addiction. Professor, UAB https://t.co/9uPspC64H1 nullius in verba
Cathy Palmer @CathyPalme13742
0 Followers 25 Following
Jawad Alaa Edeen @jawadalaaedeen
12 Followers 15 Following 🇱🇧 | Computational Biology & Data Science
Lion7575 @Lion75751
51 Followers 309 Following
thiombiano parfait @thiombianoparf2
67 Followers 359 Following
Akshay Kumar @sidha2ladka1
19 Followers 364 Following
Jennifer 💚💜 @EmmanuelLi32160
72 Followers 809 Following Forever grateful to the light, I am a committed member of the illuminati organization and I have receive my membership benefits and I am living a peaceful life.
Caio @Cainhofr
76 Followers 389 Following
Dan @danieldconger
513 Followers 1K Following enzo, @ycombinator, early @PodiumHQ, late @wendys | 1st grade spelling bee champion
Fabian Theis @fabian_theis
29K Followers 446 Following Computational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
Lior Pachter @lpachter
44K Followers 2K Following Bren Professor of Computational Biology @caltech. Blog at https://t.co/FFQzhEsmhi. Tweets represent my views, not my employer's. #methodsmatter
Itai Yanai 💔 @ItaiYanai
24K Followers 2K Following Professor at the NYU School of Medicine. Co-host of the 'Night Science Podcast' https://t.co/Sy1rcWXGLz @nightsciencepod
Arjun Raj @arjunrajlab
25K Followers 2K Following Just another LLM. Tweets do not necessarily reflect the views of people in my lab or even my own views last week. https://t.co/fZAnUCqd12
antisense. @razoralign
13K Followers 64 Following We do not know about death, because we never know about life. https://t.co/5L9IhaBKH5
Veera Rajagopal @doctorveera
17K Followers 4K Following MBBS, MD, PhD | GWAS storyteller | Scientist at Regeneron | Human genetics & drug discovery in Neuroscience & Psychiatry | He/Him
Manolis Kellis @manoliskellis
25K Followers 4K Following Dissecting disease mechanism. Single-cell, Epigenomics, Regulatory Genomics, Disease Genetics, Brain, Cancer, Metabolism. @MIT Prof, @MIT_CSAIL, @BroadInstitute
Michael Love @mikelove
18K Followers 5K Following I'm not on twitter anymore, find my on Bluesky or Mastodon
Kevin K. Yang 楊凱�.. @KevinKaichuang
16K Followers 5K Following Senior Researcher in BioML @MSFTResearch (@MSRNE). He/him/他. 🇹🇼
dana_peer @dana_peer
13K Followers 167 Following
Michael Hoffman @mich.. @michaelhoffman
23K Followers 7K Following Chair, Comp Bio & Medicine Program, Princess Margaret Cancer Centre. Assoc Prof, Med Biophysics & Comp Sci, University of Toronto. COI https://t.co/CvupKNIjZr
Jian Ma @jmuiuc
7K Followers 1K Following Ray and Stephanie Lane Professor of Computational Biology at CMU School of Computer Science @CMUCompBio @SCSatCMU @CarnegieMellon
Anne Carpenter, PhD @DrAnneCarpenter
22K Followers 2K Following Discovery in images. Enthralled by science. 5 kids. She. SAB Recursion, Quiver. Founder SyzOnc. https://t.co/CQCHnSAc9M
Ewan Birney @ewanbirney
50K Followers 2K Following Deputy Director General of EMBL, Director of EMBL-EBI. I have an insatiable love of biology. @[email protected]. I also work with ONT, Dovetail + GeL.
Jacob Schreiber @jmschreiber91
5K Followers 1K Following Post-doc @StanfordMed, studying genomics, machine learning, and fruit. Editor @StanfordAILab Blog, @JOSS_TheOJ. My code is like our genomes: most of it is junk.
Dan Landau @landau_lab
9K Followers 2K Following Cancer genomics, epigenomics and evolutionary dynamics (Weill Cornell/New York Genome Center). Hemato-oncologist (NYP). Discl.: https://t.co/tAu87FMVW3
Aaron Quinlan @aaronquinlan
17K Followers 1K Following Genome mutation, software for genomic discovery. https://t.co/6GKjALLFfk Co-director, DELPHI Data Science Init.: https://t.co/8uWRcIzWRr
Patrick Hsu @pdhsu
30K Followers 3K Following co-founder @ArcInstitute, @BerkeleyBioE professor | researcher & investor in genome editing, biotech, AI | 🇨🇦 @harvard @broadinstitute @editasmed, Fast Grants
𝕐 (@[email protected].. @nomad421
8K Followers 938 Following Associate Professor of CS @ University of Maryland. Proud Rust advocate! I ♥ science & compiled, statically-typed programming languages! Views are my own.
Wolfgang Huber 🇺�.. @wolfgangkhuber
10K Followers 1K Following Scientist working on statistical methods and applications in biology. Find me at @wkhuber.bsky.social @[email protected] Слава Україні
Zeming Lin @ebetica
2K Followers 363 Following PhD @ NYU. ESMFold / PyTorch. Climbs all day. Definitely not s̶k̶y̶n̶e̶t̶GPT5. Unsupervised learner but sometimes still gets a few rewards.
Hank Green @hankgreen
1.6M Followers 989 Following You should get some socks: https://t.co/IMXCkqywav
Orchid @OrchidInc
3K Followers 379 Following Meet Orchid, the world's first whole genome embryo screen. Get access: https://t.co/RYarzjy3KD
Michael Kosicki @michaelkosicki
292 Followers 387 Following Postdoc in Developmental Enhancerology, Embryo Engineer, Former Allele Hunter, Film Buff Without a Cause, Staunch Believer in Sentence Case.
XairaTherapeutics @Xaira_Thera
196 Followers 10 Following An integrated biotechnology company driving advances in artificial intelligence to learn the language of life and transform how we treat disease
Romain Lacombe @rlacombe
6K Followers 6K Following AI/ML⚡️+ chemE 🧪 @Stanford Building for human & planetary health Prev: founder & CEO @Plume_Labs (acq. @AccuWeather)
Bobby Hollingsworth @BobbyHollings
564 Followers 651 Following Postdoc @jwadeharperlab @HarvardCellBio | Ph.D. @BBS_Harvard @WuLabHarvard '21 | @VTEngineering '17 | @bobbyhollingsworth.bsky.social
Stanislav Fort ✨�.. @stanislavfort
10K Followers 6K Following AI @GoogleDeepMind | Stanford PhD in AI & Cambridge physics | ex-{Anthropic, Stability, Google Brain} | techno-optimism+alignment+progress+growth 🇺🇸🇨🇿
Anna Schaar @AnnaCSchaar
582 Followers 384 Following PhD student @icbmunich @TUM_Mathematics; Community Manager at @scverse
Caitlin Clark @CaitlinClark22
344K Followers 599 Following Indiana Fever | Iowa Women’s Basketball Alum | 3x USA Basketball Gold Medalist | Business Inquiries: [email protected]
Mor Nitzan @mor_nitzan
756 Followers 398 Following Faculty member at the Hebrew University, studying inference of spatial configurations and dynamics from single-cell data & self-organization in biology
derek guy @dieworkwear
850K Followers 963 Following Menswear writer. Editor at @putthison. Creator of @RLGoesHard. Bylines at The New York Times, The Washington Post, The Financial Times, Esquire, and Mr. Porter
Cate Hall @catehall
19K Followers 272 Following executive director @ Astera | born lucky | leave me anonymous feedback: https://t.co/9RtcgMyTHP How to be More Agentic: https://t.co/O3eJsrzTYW
Can Ergen @_canergen
189 Followers 134 Following Postdoc at @UCBerkeley and @UCSF. Co-mentored by @Yoseflab and @yimmieg
Arpita Kulkarni @ArpitaBKulkarni
1K Followers 2K Following Associate Director @HMS_SCC @Harvardmed | Biologist @HarvardOEB @MPI_Bio | Oncology & Neuro-psych @BrighamWomens | Innovation Discovery Award’ 22 @MGBInnovation
Ivan Zhou @ivanzhouyq
863 Followers 321 Following Build Foundation Models @Uber and @StanfordCRFM. Aspired to be full-stack AI engineer. Data-Centric AI @LandingAI, @Stanford @UofT
Virginia Adams @itsvadams
10 Followers 164 Following
David Hall @dlwh
2K Followers 1K Following Research Engineering Lead at @StanfordCRFM . Previously co-founder at Semantic Machines ⟶ MSFT. Lead developer of Levanter, Breeze. he/him @[email protected]
Ewen Callaway @ewencallaway
7K Followers 1K Following Journalist at Nature. Mostly listening. Get in touch: [email protected]
Retro Biosciences @RetroBio_
4K Followers 2 Following Aspiring to add 10 years to healthy human lifespan, starting with cellular reprogramming, autophagy, & plasma-inspired therapeutics.
Clement Chow @ClementYChow
17K Followers 5K Following henfluencer - geriatric millennial - #stopasianhate - don’t call me Clem - emotional eater™️- he/him- @chowlab
Kyle Swanson @KyleWSwanson
385 Followers 303 Following I'm a PhD student in Computer Science at Stanford University. My research focuses on machine learning applied to biomedicine and drug discovery.
Bin Shao @ShaoBin_phy
455 Followers 1K Following Computational Methods Developer, Broad Institute. deep learning; synthetic biology; single cell genomics; non-linear dynamics. opinions are my own.
Siyu He @SiyuHe7
238 Followers 413 Following Postdoc @stanford | PhD @columbia | spatial biology | statistical machine learning | tissue engineering
Jiawei Zhao @jiawzhao
319 Followers 174 Following PhD Candidate @Caltech, Fmr Research Intern @nvidia
Theofanis Karaletsos @Tkaraletsos
4K Followers 2K Following Head of AI @cziscience | probabilistic and deep ML
Jon Favreau @jonfavs
1.4M Followers 2K Following The other one. @PodSaveAmerica, @CrookedMedia, https://t.co/mKXKFl0EF4, https://t.co/zvWhe0ETFE
VantAI @vant_ai
1K Followers 3 Following Unlocking a new chapter in medicine by making protein interactions programmable
Luca Naef @NaefLuca
1K Followers 1K Following Co-Founder & CTO, @vant_ai Forbes 30u30 but won't go to jail | prev. ETH Zurich Stanford McKinsey ML for Induced Proximity Drug Discovery
Gevorg Grigoryan @ggrigoryanv
242 Followers 27 Following Scientist-turned-entrepreneur | Co-founder and CTO @generate_biomed | New paradigms in molecular science | Research Associate Professor @dartmouth
Nathan Benaich @nathanbenaich
51K Followers 32K Following solo member of investment staff @airstreet, brewing ambition @airstreetcafe, next token predictor @airstreetpress
Dominique Beaini @dom_beaini
3K Followers 492 Following Lead researcher at @valence_ai, Adjunct Prof. at @UMontreal, Associate prof at @Mila_Quebec, interested in drug discovery, GNN, physics, robotics, biology
Georg Winter @georg_e_winter
4K Followers 993 Following Chemical Biologist with passion for Cancer Research, Targeted Protein Degradation & Transcription.Scientific Founder of Proxygen & Solgate. Pats Fan. Dad.
Justin Hong @justjhong
278 Followers 258 Following CS PhD student @Columbia | Formerly @YosefLab @ucberkeley | Long time golden bear 🐻
Dan Go @FitFounder
662K Followers 430 Following High Performance Coach To Entrepreneurs | Helping 1 million transform their lives by 2027. Tweets on health optimization. Sign up for a free strategy call 👇🏽
Matt Durrant #hiring @mgdurrant
852 Followers 458 Following Mobile genetic element whisperer. Computational Biologist @arcinstitute. Genetics PhD @StanfordMed I post about programmable recombinases and genome design.
Emily Alsentzer @Emily_Alsentzer
1K Followers 960 Following @BrighamWomens & @HarvardMed postdoc fellow focusing on deployable machine learning & NLP for healthcare. Previously @mit_hst @MIT_CSAIL @stanford.
Jason Shepherd @JasonSynaptic
14K Followers 3K Following 🇿🇦🇳🇿🇺🇸Neuroscientist @UUtah. Molecular mechanisms of memory, repurposed transposons, and virus-like intercellular signaling.
Cognition @cognition_labs
124K Followers 19 Following Makers of Devin, the first AI software engineer. We are an applied AI lab focused on reasoning, and code is just the beginning. Join us: https://t.co/tpfZwEwGiq
Anders Sejr Hansen @Anders_S_Hansen
4K Followers 2K Following Associate Professor @MITdeptofBE : https://t.co/uy48t7k949 Interested in understanding the relationship between 3D genome structure and function
deWitLab @deWitLab
2K Followers 308 Following Computational & Genomics Lab studying 3D genome function and dynamics @ Netherlands Cancer Institute
Physical Intelligence @physical_int
4K Followers 8 Following Physical Intelligence (Pi), bringing AI into the physical world.
@TheChiefNerd Once again, are you lying or just incompetent? The paper that review references shows no such thing.
It’s easy to make stuff up about science if you never give your audience the proper tools to interpret results. No, the study in question did not show that modifications to mRNA made in vaccines stimulates cancer growth. They just showed that it doesn’t prevent cancer growth if…
A few words about the protests/encampments at Columbia: Back in December 2018, when I was a junior, a white student named Julian Von Abele was filmed going on an ethno-centric rant about how much he loved white people. He said things like: “White people are the best thing that…
How to be as "smart" as Auto-Regressive LLMs: - memorize lots of problem statements together with recipes on how to solve them. - to solve a new problem, retrieve the recipe whose problem statement superficially matches the new problem. - apply the recipe blindly and declare…
There’s an art to distilling these to the absolute minimal necessary text. The human brain can’t comprehend how stupid these things are without practice.
@kareem_carr I posted a long vision paper two years ago and I have given numerous talks about our research. It's an open book. LLMs are flawed but useful in the short term. FAIR is working on the next generation of AI systems.
Introducing the Domainome... Site saturation mutagenesis of 500 human protein domains reveals the contribution of protein destabilization to genetic disease by @ToniBeltran13 @CRGenomica @sangerinstitute @BGI_Genomics biorxiv.org/content/10.110…
Early pregnancy sucks bc you’re “not supposed to tell people” when there’s also the most barfing and brain fog so people think you’re rude weird & stupid. Sorry if I canceled or looked like I hated your idea the last few months! Proud to say I’ve only vomited on myself so far🤰🏻
Great GWAS paper diving deep into the contributions of germline variants to kidney cancer in 29k cases and >800k controls. I particularly love the discovery of a VHL 3' UTR variant, seen in ~10% of African and ~0.01% of European ancestries, that increase the risk of clear cell…
Pro-terrorism sentiments out in the open, celebrated, clapped for, normalized & cheered on as "resistance" & not one of these protesters challenged this person's explicit praise of Hamas, Islamic Jihad, Hezbollah or the Houthis & the gushing over Oct 7. This isn't just a "fringe"
A Vancouver protest on Friday: "Long live October 7."
@UCLA Jewish student trying to attend class is forcibly prevented entry by 6 masked Pro-Hamas students while UCLA guard stands by and DOES NOTHING. “I am a UCLA student…my class is over there. I want to use THAT entrance. Let me go in.” #AntizionismIsAntisemitism 🎥…
Love seeing long winded rants against GWAS that could be summarized into a single tweet of "I just don't like the idea but have little ACTUAL justification for it"
I always find it sadly ironic how quickly occupation protests manage to reinvent the concepts of policing, checkpoints, borders, and so on
Here’s another one from an another friend’s son @UCLA. Protestors take over access to area near school library demanding wrist bands and approval to each student passing. “So you won’t let me in because I’m Jewish?” “Ummm no… we have a couple Jewish students here … are you…
In short, stringent multiple test correction is one thing GWAS does right, and has resulted in highly replicable associations. But replication does not mean a finding is "real" or free from bias, and there are still many outstanding challenges for accurate GWAS inference. /x
Here’s an example of what I’m talking about from Frank Harrell’s otherwise excellent critique of bad biomarker analysis [fharrell.com/post/badb/]. This gets GWAS completely wrong. Genome-wide significance is not about "picking winners" or "ranking" the losers.
Beyond CZI this resource is made possible by scientists around the world. Thank you to all those that contributed including member of @humancellatlas @AllenInstitute @sangerinstitute @EU_Commission @_hubmap and many more.
We built CZ #CellxGene to provide the community with curated, interoperable single-cell data. Today, the platform has 85M+ cells & tools like Census that are being used to train new analysis models. Proud to see @Nature highlight our work & collaborators nature.com/articles/d4158…
It pains me to see facile critiques of GWAS on here from our clinical/biostats friends while the many actually good reasons to be critical of GWAS get little attention. So here's a thread on what GWAS does, what critics get wrong, and where GWAS is genuinely still lacking. 🧵:
@beenwrekt @Data_David1 You should. I think it would be very valuable for people to see not all "AI experts" back this stuff and believe we'll die. The doomers have been using the few researchers who do
@Data_David1 The bill? Or the absurd media infatuation with Hinton and Bengio?
@arjunrajlab Even without the interpretability layer, AI-models can enrich for large impact experiments, which will help us find more interesting cases to dissect mechanistically, faster. It's another tool, not a substitute for thinking.
Very excited to share our new MPRA study on rare variants and cancer somatic mutations in the 3' UTR. Really proud of my former students @ting_fu_21 and @kofiamoah435 for spearheading this effort. Great collaboration with @srikosuri and team. nature.com/articles/s4146…
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