Saez-Rodriguez Group @saezlab
Account of the Saez-Rodriguez lab at Heidelberg University Lab members tweet about our news, activities & publications Also at: https://t.co/YFqkPcH6dY saezlab.org Heidelberg, Germany Joined March 2012-
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Our alumna Sophia Müller-Dott was honored with the MTZ Award for Systems Medicine for her PhD work. Congratulations, @sophia_mullerd ! 🎉 A special thanks to Monika and Thomas Zimmermann from the @MTZfoundation for their enduring support of Systems Medicine. 🙌
Led by José Linares Blanco, supervision from @JulioSaezRod and @roramirezf94, contributions from @psl_schaefer, Leoni Zimmermann, Ricardo Melo Ferreira, Daniel Toro Dominguez, @pcarmonasaez, @tanevski, Marta E. Alarcon Riquelme and Michael T. Eadon.
Together, this links systemic immune programs measured in blood to local tissue pathology in lupus nephritis. We see our patient map as a reference where SLE or other autoimmune cohorts can be analyzed. GitHub: github.com/saezlab/metalu…
1/🧵New preprint! We built a patient-level map of systemic lupus erythematosus using single-cell blood transcriptomics, linking multicellular immune coordination to patient heterogeneity, future disease activity, and potential tissue pathology. ➡️ doi.org/10.64898/2026.…
This month we welcome Ajita Shree as a postdoctoral researcher, who will be working on computational methods for cell–cell communication🎉. Ajita has a background in developing deep generative models for single-cell & spatial transcriptomics.
Great to see how Tunca Doğan's team, our collaborators at Hacettepe University, used OmniPath software for building CROssBARv2 and grateful for their contributions to OmniPath development. See details below 👇
🚀 Exciting news! Our project, CROssBARv2, is now live as an online tool and its article (preprint)! We've built a unified AI-powered platform that brings together the fragmented world of biomedical data — and lets you talk to it in plain English. Here's the story 👇 The
This work was led by Robin Fallegger and Sergio A. Gomez-Ochoa, supervised by @JulioSaezRod with Matthias Kretzler and Michael T Eadon. Thanks to all involved, including Charlotte Boys, @roramirezf94, @tanevski, and many more. We thank all funders and patient participants!
A step toward molecularly grounded, precision assessment of kidney injury and the possibility of non-invasive tracking of tissue damage using blood and urine biomarkers.
What does single-cell transcriptomics reveal about individual patients with acute (AKI) and chronic (CKD) kidney 🫘 disease? Can we use it to find new biomarkers? In our new preprint, we asked this using biopsies from 150+ participants from the Kidney Precision Medicine Project.
This study was led by @l_kuechenhoff, with supervision by @JulioSaezRod and @roramirezf94 & contributions from Gahyun Kim, @JanLanzer, and Matthias Kretzler. We greatfully acknowledge funding from the German Federal Ministry of Research, Technology, and Space (@bmftr_bund)
We further combine single-cell data with spatial transcriptomics to identify spatially constrained fibrotic cell signalling events shared across organs. All results are published as an open resource to support further discovery: organfibrosis.saezlab.org
🧵 See 👇 our new preprint on shared and organ-specific gene expression programs of fibrotic diseases 🧬 📄 Paper: doi.org/10.64898/2026.… 📊 Explore the data: organfibrosis.saezlab.org
Fabian Theis @fabian_theis
37K Followers 429 Following Computational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
Ming "Tommy" Tang @tangming2005
46K Followers 3K Following Director of bioinformatics at AstraZeneca. YouTube at chatomics. On my way to helping 1 million people learn bioinformatics. Also talks about leadership.
Itai Yanai @ItaiYanai
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FrezzaLab @FrezzaLab
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Manolis Kellis @manoliskellis
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Michael Love @mikelove
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Mo Lotfollahi @mo_lotfollahi
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Costa Lab - @costalab... @vanvanka123
906 Followers 374 Following This is the official twitter account from the Institute of Computational Genomics, RWTH Aachen. Also present in @[email protected]
Anshul Kundaje @anshulkundaje
31K Followers 3K Following Federally funded academic research is the innovation engine of the US economy. Reform is welcome. Destruction will have long term consequences.
Pedro Beltrao @pedrobeltrao
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EMBL @embl
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Cristina Viéitez (@c... @Cris_Vieitez
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Michael Hoffman @mich... @michaelhoffman
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Kerstin Göpfrich @KGoepfrich
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Ejv @ejvillablanca
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Alejo Rodriguez-Frati... @AlejoFraticelli
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Melike Dönertaş @melikedonertas
5K Followers 1K Following Junior Group Leader @LeibnizFLI prev @EMBOFellows @MPIAGE @Cambridge_Uni @EMBLEBI @METU_ODTU @iscb @ekoevoder #aging #bioinformatics #microbiome #rstats
Eytan Ruppin, MD, PhD @EytanRuppin
5K Followers 1K Following Computational precision oncology researcher | Chess & bridge enthusiast ♟️🃏 Ethnic music lover 🎵 Seinfeld fanatic 📺 Sci-fi aficionado 🛸 | All views my own
Daniela Robles @danie... @daniela_oaks
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Vitalii Kleshchevniko... @vitaliikl
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ChloeHu @ChloeHuLucky
2 Followers 364 Following
Adrián Chalco @AdrinChalco2
1 Followers 82 Following
M Talha Fayyaz @talhamedtech
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Duy Phan MD, PhD @Phan_Q_Duy
730 Followers 1K Following MD/PhD @yalemed | BS @JohnsHopkins | @ForbesUnder30 | Views are my own
Adam Vivian-Smith �... @phylogenypluckr
843 Followers 6K Following scientist + dad | interests; plant reproduction, genetics, evolution, paleobotany, seed plants, genomics/bioinformatics
Kyle Farh MD PhD - Il... @KyleFarh
382 Followers 1K Following Head of Illumina AI Lab. Deep Learning. Human Genetics. Perturb-seq.
Mikhaeel Atef Rizk @mikhaeel1182701
0 Followers 35 Following PharmD (GUC). Built bindsight: open-source RNA-seq → de novo protein binder pipeline. JOSS in review. Applying to MSc programmes WS 2026/27. Cairo 🇪🇬
Nur Syahrir @nhasyahrir
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Mohamed Sharabi @Mohamed654shar
4 Followers 129 Following
Loic Chadoutaud @LoicChadout
3 Followers 81 Following
Dr Andrzej Kubiak @AndrzejKubiak11
798 Followers 1K Following Mechanobiology, imaging and stem cells. Postdoc @USCStemCell🇺🇸 Former: @univamu🇫🇷 @lekka_lab🇵🇱 @laStatale🇮🇹
Caicai @Caicai1769065
1 Followers 103 Following
Waggoner Lab @LabWaggoner
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Sydney Rechie Necesar... @RechieSydN
3 Followers 89 Following
N0ne @N0ne_Official
20 Followers 303 Following I do cosmos-inspired ai that runs on biology-inspired HW to compute philosophy-inspired concepts whilst solving medical problems. &poetry, ethics
Hysigen Bio @HysigenB27180
8 Followers 502 Following Experienced CRISPR gene editing company. Cell line construction and knockout, knockin, and activation/inhibition conductor. Whatsapp: +1(909)352-8083.
Sergio Civera @scivera
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Tomás Lopes @lopes_tpo
4 Followers 212 Following
Michael Vinyard @vinyard_m
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Carmen Sandoval-Filar... @car_men_ita
745 Followers 4K Following keepin it real in AI x Bio. single-cell genomics 🧬 bikes, bulldogs, everything brazilian. ex-genentech | ex-ucsf | ex-lcg unam 🇲🇽 🐾
Guojun Han @GuojunHan
145 Followers 2K Following
Trinobia @trinobia
28 Followers 756 Following Data-driven Computational Bio-medical Solutions 🧬🔬💡🖥️ Bioinformatics • AI • Research • Training • Consulting ⚡ Data → Discovery → Impact
Abdalmuiz Zahda @abdalmuizzahda
169 Followers 6K Following Medical student | Research-Focused, EBM-Oriented | Interests: Internal Medicine & Public Health | Speaker & Volunteer
Alexis Molina @alexismolmr
2 Followers 183 Following PhD @ AITHYRA | AI for Bio also prev: @alexismolinamr
Pham Hoang Anh @phzenanhiu
8 Followers 390 Following
Takashi Nishina @nishina_takashi
2K Followers 3K Following Researcher #Tumor, #Immunology, #Fibroblasts, #Intestine, #Inflammation, #CAFs Toho University, Views are my own. In bluesky, @takashi-nishina.bsky.social
snowxue @beiusnowxue
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Rebekah George @littlecurrypuff
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Mısra @misratasci
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Ariel Berardino @ariberar
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aln🇺🇦 @systemnaBio
307 Followers 506 Following Systems Biology, Bioinformatics and other fun things🥃 Mastodon: @[email protected]
SigmaticSciences @SigmaticScience
10 Followers 176 Following The Agentic Operating System for Life Science R&D
vishwaraj sontake @v_sontake
89 Followers 262 Following Lung biology, aging, genetherapy. Scientist. Views are my own.
Daniel Sungchul Choi @DanielSChoiMD
54 Followers 563 Following MD @yonsei_u | Aspiring Heme/Onc Physician-Scientist | @MDAndersonNews Leukemia
hanlin xu @hanlinxu9
0 Followers 224 Following
Ci Chu @inCiChu
135 Followers 225 Following SVP, AI-enabled Discoveries @ Xaira | Building virtual cells for drug discovery | ex-insitro, Verily, Google X | Opinions my own
Hyobin Kim @HyobinKim4
93 Followers 126 Following Research Professor at Korea University College of Medicine #SpatialTranscriptomics #scRNAseq #CellCellInteractions #GeneRegulation #BooleanNetworks
Luke Robinson @LukeRob63196697
4 Followers 238 Following
Harish Narasimhan @hnarasim23
508 Followers 2K Following Postdoc @SchillerLab, interested in all things aging and immunology. Prev @Jie_Immunology lab @UVA_MIC, @MayoClinic | @KleinLab @JohnsHopkinsSPH | @MIT_Manipal
Martin Borch Jensen @MartinBJensen
7K Followers 639 Following Longevity Industrialized. @GordianBio: pooled in vivo screening for therapeutic abundance. @NornGroup, @impetusgrants: 501c3 addressing bottlenecks to progress.
Fabian Theis @fabian_theis
37K Followers 429 Following Computational biologist @HelmholtzMunich, prof @TU_Muenchen & associate PI @sangerinstitute. Dad of 4 and mountain lover. Department news, see @CompHealthMuc
Itai Yanai @ItaiYanai
34K Followers 2K Following Professor at the NYU School of Medicine. Co-host of the 'Night Science Podcast' @nightsciencepod and Co-founder of the Night Science Institute https://t.co/lede3rBmXU
Prof. Nikolai Slavov @slavov_n
39K Followers 267 Following Mentor, scientist & engineer. Director of @ParallelSqTech. Having fun in @SlavovLab with single-cell proteomics & ribosomes. Organizer of @SCP_meeting
Lior Pachter @lpachter
66K Followers 2K Following Bren Professor of Computational Biology @caltech. Blog at https://t.co/FFQzhEsmhi. Tweets represent my views, not my employer's. #methodsmatter
dana_peer @dana_peer
15K Followers 166 Following
FrezzaLab @FrezzaLab
27K Followers 2K Following We are a group of metabolism-lovers, focused on mitochondrial metabolism. Tweets are from Christian. https://t.co/EbWsJo6DnZ
Manolis Kellis @manoliskellis
46K Followers 4K Following Dissecting disease mechanism. Single-cell, Epigenomics, Regulatory Genomics, Disease Genetics, Brain, Cancer, Metabolism. @MIT Prof, @MIT_CSAIL, @BroadInstitute
Arjun Raj @arjunrajlab
46K Followers 2K Following Just another LLM. Tweets do not necessarily reflect the views of people in my lab or even my own views last week. https://t.co/fZAnUCqd12
Mo Lotfollahi @mo_lotfollahi
13K Followers 4K Following ML for biology and drug discovery | Faculty @sangerinstitute @Cambridge_uni
Costa Lab - @costalab... @vanvanka123
906 Followers 374 Following This is the official twitter account from the Institute of Computational Genomics, RWTH Aachen. Also present in @[email protected]
Matthias Mann Lab @labs_mann
14K Followers 81 Following The Mann Lab is a pioneer in mass spectrometry-based proteomics. Tweets represent personal views from lab members and Matthias Mann @MPI_Biochem and @UCPH_CPR.
Anshul Kundaje @anshulkundaje
31K Followers 3K Following Federally funded academic research is the innovation engine of the US economy. Reform is welcome. Destruction will have long term consequences.
Pedro Beltrao @pedrobeltrao
7K Followers 1K Following Associate professor at ETH (@IMSB_ETH) studying the cellular consequences of genetic variation. Part of @theLoopZurich.
EMBL @embl
67K Followers 910 Following The European Molecular Biology Laboratory drives visionary basic research and technology development in the life sciences. 🦋 https://t.co/r840DbdMXO
Michael Hoffman @mich... @michaelhoffman
23K Followers 6K Following Chair, Comp Bio & Medicine Program, Princess Margaret Cancer Centre, @UHN. Assoc Prof, Medical Biophysics, University of Toronto. COI https://t.co/CvupKNIjZr
Uri Alon @UriAlonWeizmann
12K Followers 493 Following Now on Bluesky @urialonlab.bsky.social The Alon lab explores design principles of biological circuits, focusing on systems medicine, ageing and healthspan.
Kerstin Göpfrich @KGoepfrich
8K Followers 3K Following Professor @ZMBHh @UniHeidelberg. We engineer a synthetic model cell with lipid vesicles and DNA/RNA origami-based molecular hardware. [email protected]
Ejv @ejvillablanca
6K Followers 1K Following
Eytan Ruppin, MD, PhD @EytanRuppin
5K Followers 1K Following Computational precision oncology researcher | Chess & bridge enthusiast ♟️🃏 Ethnic music lover 🎵 Seinfeld fanatic 📺 Sci-fi aficionado 🛸 | All views my own
Daniela Robles @danie... @daniela_oaks
8K Followers 7K Following Studying cancer genomics in Latin America. PI @LIIGH_UNAM /Int'l Fellow @SangerInstitute /PhD @Cambridge_Uni /BSc @lcgunam. Views are my own. She/her/hers
Nadine Tüchler @NadineTuechler
144 Followers 277 Following PhD @embl and @MMPU_Heidelberg @saezlab and Pepperkok lab | @gsf_lab | @KingsCollegeLon | Biotechnology @fhkrems
Ahmet Rifaioğlu @ahmet_rifaioglu
3K Followers 435 Following Researcher at @UniHeidelberg @uniklinik_hd @saezlab| PhD & MSc @METU_ODTU
Daniel Guerrero-Romer... @DannGuerreroR
374 Followers 509 Following Postdoctoral fellow EMBL-EBI & AstraZeneca UK | Interested in studying mathematical & ML approaches in cancer evolution and drug response.
Shyam Prabhakar Lab @shyam_lab
2K Followers 514 Following Associate Director Spatial and Single Cell Systems @astar_gis. Genomics: algorithms, disease markers & mechanisms, genetic diversity [email protected]
Carl Anderson @anderson_carl
3K Followers 902 Following Head of Human Genetics and Senior Group Leader (Genomics of Inflammation and Immunity) at Wellcome Sanger Institute. #firstgen
Sara Aghamiri @SaraAghamiri_
189 Followers 407 Following Entrepreneur | Human Digital Twin developer | Biomedical Engineer | @UnivParisSaclay @Inserm @EU_Commission @UNLincoln @SIIM_Tweets🎾🎹🎮🎨♟️
Nadav Yayon @YayonNadav
426 Followers 419 Following Postdoctoral fellow at the labs of Sarah Teichmann (Sanger), John Marioni and Virginie Uhlmann (EMBL-EBI). PhD in molecular and computational neuroscience.
European Society for ... @SpatialBio
373 Followers 20 Following ESSB is a non-profit organization run by scientists dedicated to the fascinating world of spatial biology.
EMBL-EBI @emblebi
73K Followers 567 Following EMBL-EBI provides open biological data resources and tools, and performs basic research in computational biology. https://t.co/wA8UjwMy6L
The BATLLE Lab @BatlleLab
3K Followers 442 Following We work on residual disease and metastasis by colorectal cancer from the perspective of cancer stem cells and their interaction with the tumor microenvironment.
eriksahailab @eriksahailab
3K Followers 55 Following we want to find out how life works because we're curious and because we'd like to improve the outlook for cancer patients
Stefania Giacomello @giacomello_lab
701 Followers 327 Following Group Leader @scilifelab, Assoc. Prof. @KTHuniversity, Science Co-Chair ISSOP, TT ESA Space Omics, NASA GeneLab, DEI @scilifelab
Rob Finn @robdfinn
1K Followers 221 Following
Gary Siuzdak @kadzuis
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Petter Bjornstad, M.D... @PBjornstadMD
404 Followers 646 Following Professor of Pediatrics & Medicine @UWEndocrinology and @seattlechildren. Raisbeck Endowed Chair of Diabetes Research. Director @UWMDI_UWMed.
Roser Torra @torra_roser
3K Followers 2K Following nephrologist, President of @ERAkidney @FPuigvert @UABBarcelona @IRSantPau, FERA, enthusiastic about genetic kidney diseases, enjoying life, views my own
Chiadi Ndumele @ChiadiNdumele
555 Followers 89 Following Associate Professor, Cardiology @hopkinsheart @HopkinsMedicine | Director of Obesity and Cardiometabolic Research @CiccaroneCenter | Husband, father and son
Morgan Grams @meg21212
1K Followers 530 Following precision medicine | nephrology | epidemiology | NYU | opinions = mine alone
Valentina Boeva @val_boeva
1K Followers 183 Following Assistant professor at the Department of Computer Science
Craig Glastonbury @C_Glastonbury
2K Followers 1K Following Bio x AI - Senior Group Leader @humantechnopole. ex-Lead ML Researcher @benevolent_ai. ex-advisor to PHP. Current Hon. Res. Fellow in ML @UniofOxford. 🏳️🌈
Shreeram Akilesh 🐙 @podocytes
775 Followers 358 Following Associate Professor, Renal Pathologist and #kidneyomics Researcher. Tweets are my opinions not medical advice. #renalpath
Titus J. Brinker, MD @TitusBrinker
886 Followers 312 Following Head of AI Division at the German Cancer Research Center: https://t.co/kFlcJzItuA
Emmanuel Saliba @AE_Saliba
1K Followers 2K Following Professor University Würzburg @Uni_WUE | Group Leader @Helmholtz_HIRI | RNA biology | Single cell genomics | Infectious diseases | 🇪🇺 🇫🇷 | Vivons Curieux!
Guigó Lab @GuigoLab
888 Followers 65 Following Roderic Guigó's Computational Biology of RNA Processing Lab @CRGenomica
Segata Lab @cibiocm
5K Followers 447 Following The Laboratory of Computational Metagenomics led by @nsegata **We are hiring, get in touch if interested!** Moderator @svetlana_up
Verónica Lloréns-Ri... @VeroLlorens
2K Followers 2K Following Junior Group Leader @CIPFciencia | PD @VIB_microbes + PhD @CRGenomica | #GutMicrobiome #Metatranscriptomics #Metagenomics. Now at @[email protected]
Nicola Segata @nsegata
5K Followers 803 Following Professor at @CIBIO_UniTrento and head of the @cibiocm lab working on metagenomics, the human microbiome and computational biology.
Victor Paton @vicpaton
69 Followers 91 Following PhD candidate at @EMBL @EMBLBarcelona, previously @UniHeidelberg @saezlab. Also in Bluesky https://t.co/2JDEEyNskj
Dr. Tijana Milenkovic @ProfMilenkovic
702 Followers 238 Following Professor of #ComputerScience. Researcher in #NetworkScience & #ComputationalBiology. Huge #CocaColaFan. Even bigger #DogPerson. We need more #WomenInComputing!
Matthias Lutolf @TheLutolfLab
6K Followers 361 Following Institute of Human Biology (IHB), Roche, Basel, Switzerland. Institute of Bioengineering, EPFL, Switzerland. #organoids, #tumoroids, #stemcells, #bioengineering
Gray Camp @GrayCampLab
4K Followers 531 Following Curiosity. Human Model Systems. EvoDevo. CompBio. Translation. Institute of Human Biology. Basel. [email protected]
Alicia Oshlack @AliciaOshlack
9K Followers 1K Following Bioinformatics, computational biology, genomics, Women in Science
Lappalainen Lab @tuuliel_lab
5K Followers 578 Following Functional human genomics @ KTH, SciLifeLab, NY Genome Center. Pro science here, more fun stuff fun at @tuuliel. Mastodon [email protected]
Muzlifah Haniffa @Muzz_Haniffa
2K Followers 365 Following Clinician #scientist passionate about #immunobiology & #genomics. Mother, mentor, food enthusiast & film buff!
Barbara Engelhardt @BeEngelhardt
10K Followers 995 Following Machine learning, statistical genomics, ML4 health, senior investigator at Gladstone Institutes, professor at Stanford, single mom to four kids. she/her
Nicole Soranzo @nicolesoranzo
4K Followers 3K Following Human geneticist. Senior group leader at @sangerinstitute and @cambridge_uni, Head of Genomics @humantechnopole
Health + Life Science... @ResearchLifesci
992 Followers 190 Following Health + Life Science Alliance #Heidelberg #Mannheim - Center of Excellence in the #Life Sciences
Opitz lab @LabOpitz
429 Followers 290 Following
Rafael Irizarry @rafalab
29K Followers 490 Following Applied statistician. I tweet data-driven observations, data science educational materials, academic research updates, and the occasional joke.
Pierre-Louis THARAUX @PLTharaux
941 Followers 2K Following M.D., PhD. INSERM Prof #nephrology #vasculitis #LaSciencePourLaSanté #therapies for #rare diseases #kidneydiseases Les tweets ne sont pas des conseils médicaux
carsten marr @MarrCarsten
645 Followers 128 Following Analyzing and modeling single cells in biomedical data
EndoPrincesa @EndoPrincesa
410 Followers 218 Following Endocrinology and nutrition group at Hospital Universitario La Princesa (Spain). Research and clinics. Group leaders: Mónica Marazuela and Rebeca Martínez
Shaun Mahony @mahonylab
2K Followers 1K Following Studying gene regulation and transcription factor binding specificity with machine learning. Assoc Prof @ Penn State. 🇮🇪
HI-STEM - Cancer and ... @hi_stem_lab
2K Followers 1K Following The Stem Cell Research Institute @DKFZ HI-STEM (Heidelberg Institute for Stem Cell Technology and Experimental Medicine) gGmbH Head: Andreas Trumpp
Translational Medical... @TMO_Heidelberg
823 Followers 591 Following Multidisciplinary division at DKFZ and NCT Heidelberg focused on translational cancer research and precision oncology trials.
Müller-Tidow Lab @LabTidow
584 Followers 267 Following Our group's aim is to identify pathogenetic mechanisms in acute leukemias and other cancers to ultimately develop and test novel therapy approaches
Xiao Wang @WangXiaoLab
6K Followers 508 Following Associate Professor at MIT Chemistry and Core Member at Broad Institute of MIT and Harvard











