Gene Ontology @[email protected] @news4go
The Gene Ontology project provides a controlled vocabulary to describe gene and gene product attributes in any organism. geneontology.org Joined January 2009-
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Best way to celebrate #itsgonnabemay? A bonus GO release to wrap up April! Details for the second April release (2024-04-24): community.alliancegenome.org/t/second-april… #GeneOntology
Holy Pathways, Batman! Did you know you can find GO-powered Pathways on @alliancegenome pages? community.alliancegenome.org/t/go-cams-on-a…
Meet #GEMLI: A powerful tool from Lausanne's Institute of Bioengineering for robust cell lineage identification from scRNA-seq dataset. Quick Read: cbirt.net/untangling-the… #Bioinformatics #CellLineages #scRNAseq #GeneExpression #GeneOntology #CancerResearch #sciencenews
Which biological domains are most associated with the risk of #Alzheimers? Researchers at Sage create risk scores across domains & drill down into the most significantly associated sets of gene ontology terms & annotated genes for potential therapeutics: alz-journals.onlinelibrary.wiley.com/doi/10.1002/tr…
Happy #DNADay2024! Today's @alliancegenome forum post highlights some of the close ties between the Human Genome Project and the #GeneOntology: both Dr. David Botstein and Dr. Paul Thomas. community.alliancegenome.org/t/happy-dna-da… @KeckMedicineUSC
New in #GeneGroups! Have you wanted a one-stop resource to find Drosophila genes involved in transmembrane transport? We've compiled the Transmembrane Transporter Collection. TRANSMEMBRANE TRANSPORTERS flybase.org/reports/FBgg00… was assembled from multiple sources, including
Rice, wheat, bamboo, maize... the Poaceae family is immense. Read the new @NatureComms publication that looks at WGD in the massive grass family: #wholegenomeduplication community.alliancegenome.org/t/go-and-whole…
Calling all scientists who study #genetics and #genomics – you’re familiar with resources like databases, knowledgebases, and stock centers, including @news4go. Support the funding and growth of these resources by citing them in-text your next paper! bit.ly/4adNAMR
Ever try to look up a term in AmiGO, but the results included extra terms? That's a feature not a 🐞! Read about how we use closures to show you ontology search results- and how you can restrict this if needed #ontology community.alliancegenome.org/t/tuesdaytips-…
Try out the new TAIR on beta.arabidopsis.org. During the testing period, please report bugs or send any feedback to [email protected]. The new site will go live in the next month. #plantscience #arabidopsis
New GO release! 2024-04-18 is available now! current.geneontology.org release.geneontology.org/2024-04-18 10.5281/zenodo.10999780 42,271 GO terms 7,668,043 annotations 1,536,109 gene products 5,404 species More info & release notes: community.alliancegenome.org/t/april-2024-g… #newdata
In addition to citing these references, GO asks users/tool devs/etc. to include the GO Release. Does GO really change that much?... Yes! community.alliancegenome.org/t/archive-of-g…
In addition to citing these references, GO asks users/tool devs/etc. to include the GO Release. Does GO really change that much?... Yes! community.alliancegenome.org/t/archive-of-g… https://t.co/byvnDWh7KN
If you use GO at any point in your project, we ask you cite our original paper and the most recent update: ➡️doi.org/10.1093/geneti… ➡️doi.org/10.1038/75556 Full citation policy at geneontology.org/docs/go-citati…
If you use GO at any point in your project, we ask you cite our original paper and the most recent update: ➡️doi.org/10.1093/geneti… ➡️doi.org/10.1038/75556 Full citation policy at geneontology.org/docs/go-citati…
Today's paper highlight: new @SciReports that uses #GeneOntology and could help advance research on liver cancer #CancerResearch community.alliancegenome.org/t/go-and-hepat…
#TuesdayTips: Did you know there's a free #OpenAccess GO Handbook? We're highlighting the first chapter, which is an overview of #ontologies in general: community.alliancegenome.org/t/go-handbook-…
Reminder! As part of our ongoing effort to enhance your experience and modernize our services, several of our legacy virus-related web resources will be replaced by NCBI Virus – our community portal for viral sequence data effective June 2024. Learn more: ow.ly/KJxq50RgyYf
Calling all yeast folks – you’re familiar with resources like databases, knowledgebases, and stock centers, including @yeastgenome. Support the funding and growth of these resources by citing them in-text in your next paper! bit.ly/4a9PKgp #Genetics #Genomics
We love to see it! Remember you can also enrich for Medaka genes using the GO panther enrichment tool pantherdb.org
We love to see it! Remember you can also enrich for Medaka genes using the GO panther enrichment tool pantherdb.org
Sugar: eating it is easy... studying the ~9Gb sugarcane genome, not so easy. Read how Bao et al. assembled the ultra-complex modern hybrid sugarcane genome, and how GO helped identify important genes: @NatureComms community.alliancegenome.org/t/go-and-hybri…
Your rat can be a star of 2025! It's Calendar time at RGD! Please send your hi res photos of rats to [email protected]. We are looking forward to seeing your amazing photos, artwork, or prose. See rgd.mcw.edu/wg/rgd2025cale… for more information.
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639 Followers 383 Following The innovative human proteins-centric knowledge platformThe latest Disease Ontology release (v2024-04-30) is now available! 🎉 Learn about the latest updates at github.com/DiseaseOntolog… 🧬 #DOrelease #DiseaseReseach #Bioinformatics #FAIR #ComputationalBiology
Check out GenBank release 260.0, now available on the NCBI FTP site. This release has 31.18 trillion bases and 4.46 billion records! Learn more: ow.ly/5bJ650Rr4Tx
The top #WebOntologyLanguage repos are: 🏆 1. stardog-union/pellet - ★301, 154 forks 2. karimouda/qurananalysis - ★78, 27 forks 3. @news4go/protege-tutorial - ★53, 40 forks 4. RDFLib/FuXi - ★51, 28 forks Total: 1.79k repos stardev.io/top/repos/web_…
Meet #GEMLI: A powerful tool from Lausanne's Institute of Bioengineering for robust cell lineage identification from scRNA-seq dataset. Quick Read: cbirt.net/untangling-the… #Bioinformatics #CellLineages #scRNAseq #GeneExpression #GeneOntology #CancerResearch #sciencenews
Which biological domains are most associated with the risk of #Alzheimers? Researchers at Sage create risk scores across domains & drill down into the most significantly associated sets of gene ontology terms & annotated genes for potential therapeutics: alz-journals.onlinelibrary.wiley.com/doi/10.1002/tr…
Happy #DNADay24! It truly is the perfect date.
We're pleased to share our spring newsletter updating you on GBC's recent and future activities bit.ly/3Ux8OQj #globalbiodata #openscience
To celebrate #DNADay and our 🎂#anniversary🎂 we created some short #tweetorials called #gwasplanation for our variant pages 🧵👇👇
Happy #DNADay! The day commemorates the completion of the Human Genome Project in 2003 and the discovery of DNA's double helix in 1953. Get to know more about DNA with our free on-demand #bioinformatics training materials dedicated to the subject: ebi.ac.uk/training/on-de…
Happy National #DNADay24! Today, the anniversary of the discovery of the double helix, is a great day to download genome data packages from NCBI Datasets. Check it out: ow.ly/h8rQ50Ro4K4
Keep an eye out for the upcoming Disease Ontology "acronym_test" and "mim_test_release" coming in May! These releases will annotate the synonyms that are acronyms and change the cross-reference prefix label from ‘OMIM’ to ‘MIM.’
data from Gene Ontology GO) annotation, the Transporter Classification Database tcdb.org and publications. (we've reviewed and updated GO annotation to be more accurate and to provide better coverage). TRANSMEMBRANE TRANSPORTERS are divided into four major classes:
CHANNELS AND PORES flybase.org/reports/FBgg00…, PRIMARY ACTIVE TRANSPORTERS flybase.org/reports/FBgg00…, PROTEIN TRANSLOCASES, DISLOCASES AND MEMBRANE INSERTASES flybase.org/reports/FBgg00… and the SOLUTE CARRIER FAMILY flybase.org/reports/FBgg00…. @news4go
@news4go In total, 1112 genes have been assembled into 229 transporter sub-groups based on functional and sequence features. We believe this to be the most comprehensive resource for Drosophila melanogaster transmembrane transporters and we welcome community feedback to help improve it
New in #GeneGroups! Have you wanted a one-stop resource to find Drosophila genes involved in transmembrane transport? We've compiled the Transmembrane Transporter Collection. TRANSMEMBRANE TRANSPORTERS flybase.org/reports/FBgg00… was assembled from multiple sources, including
Calling all scientists who study #genetics and #genomics – you’re familiar with resources like databases, knowledgebases, and stock centers, including @news4go. Support the funding and growth of these resources by citing them in-text your next paper! bit.ly/4adNAMR
Try out the new TAIR on beta.arabidopsis.org. During the testing period, please report bugs or send any feedback to [email protected]. The new site will go live in the next month. #plantscience #arabidopsis
Citation of your beloved resources has never been more critical. We are evaluated on usage and citation, but citation rates are relatively low.
Yes absolutely! Cite all resources used, even if only at preliminary stages in your project! Find SGD's citation policy at sites.google.com/view/yeastgeno… #APOYG
🐁 Why do researchers work with mice? What is a #mousemodel? How can research in mice lead to new ways to prevent and treat disease? jax.org/why-the-mouse
#ICYMI, these are 15 of the 17 JGI flagship plant species that comprise the JGI Plant Gene Atlas, an updateable transcriptome resource generated from a multi-laboratory collaboration. Learn more: jgi.doe.gov/a-collaboratio…
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