Joint Genome Institute @jgi
We are a User Facility providing access to integrative genome science capabilities. Located @BerkeleyLab. Work with us: https://t.co/JliQ4XxSzV jgi.doe.gov Berkeley, CA Joined February 2009-
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[VIDEO] David Des Marais of @MIT at the #JGI2023 Annual Meeting: “The physiological control of growth rate variation in the model grass Brachypodium” youtube.com/watch?v=IbK2DV…
GENOME WATCH: "Microbial adaptability in changing environments" examines the use of large-scale monitoring to examine feedback btwn environmental change and microbial adaptation: rdcu.be/dEWFy @NatureRevMicro @sharGblum (Art: Philip Patenall/Springer Nature Limited)
👀 2+ decades of samples👀 from #LakeMendota took a journey from @UWMadison to @BerkeleyLab, then data went to the Summit computing cluster at @ORNL in TN, back to the JGI and back to WI. Learn more in our #GenomeInsider podcast: jointgeno.me/s04e07 @LBNLcs @UWMadEngr
[VIDEO] Peggy Ozias-Akins of @universityofga at the #JGI2023 Annual Meeting: “Discovering conservation among chaos — path to superior clones?” youtube.com/watch?v=JZjtIE…
#ICYMI the #1KFG project has brought together 400+ proposal collaborators & co-authors with affiliations at 180+ orgs in 29 US states and 35 countries. Of the 85 proposal collaborators, 58 had never shared a proposal with each other prior: jgi.doe.gov/jgi-at-25-usin…
"Our team sought to answer how much of the 'microbial metabolism' viruses are actually manipulating during infection." -Matt Sullivan @Lab_Sullivan on @NatureComms work enabled in part by FICUS @jgi @EMSLscience. @doescience news.osu.edu/microbial-viru…
🌍 This #EarthWeek2024, we're highlighting @BerkeleyLab research based on Earth's resources and elements, today's: hydrogen. EESA scientists are studying the potential of geologic hydrogen as a carbon-free energy source. Learn more: bit.ly/499p7ru
🚨SAVE THE DATE🚨 The #JGI2024 Annual Meeting will be held Sept. 30–Oct. 4 at the Walnut Creek Marriott. Stay up to date by signing up for our newsletter! jointgeno.me/newsletter
[VIDEO] Keynote Edward Holmes of @Sydney_Uni at the #JGI2023 Annual Meeting: “Redefining Virus Macroevolution” youtube.com/watch?v=JnXZQ3…
How do supercomputers work? The JGI's Chief Informatics Officer @KjierstenFagnan says it's a lot like a breakfast waffle. Learn more in this three-part series of our #GenomeInsider podcast: jointgeno.me/s04e07 @BerkeleyLab @LBNLcs @UWMadEngr
"This was the most complicated genome sequence we’ve yet completed. It shows how far we’ve come. This is the kind of thing that 10 yrs ago people thought was impossible.” -Jeremy Schmutz @jgi @hudsonalpha @jbei @BerkeleyLab @phytozome @doescience @Nature newscenter.lbl.gov/2024/03/27/swe…
🚨SAVE THE DATE🚨 The #JGI2024 Annual Meeting will be held Sept. 30–Oct. 4 at the Walnut Creek Marriott. Stay up to date by signing up for our newsletter! jointgeno.me/newsletter
Happy 🧬#DNADay🧬! Last year, the JGI surpassed 3 petabases—or more than 3 QUADRILLION base pairs—of DNA sequenced. In 2023 alone, our sequence output was 717 trillion bases. 🤯 Learn how to work with us at jointgeno.me/proposals. @doescience @BerkeleyLab @SSURFacilities
GENOME WATCH: "Microbial adaptability in changing environments" examines the use of large-scale monitoring to examine feedback btwn environmental change and microbial adaptation: rdcu.be/dEWFy @NatureRevMicro @sharGblum (Art: Philip Patenall/Springer Nature Limited)
#ICYMI @ActinoBase connects the global community of researchers studying actinobacteria to share information and data: jgi.doe.gov/supporting-glo… @HOtani_JGI @NigelJMouncey @kate_duncan @MicrobioSoc
[VIDEO] Robert Chemelewski of @TAMU at the #JGI2023 Annual Meeting: “Epicuticular Wax Accumulation and Regulation of Wax Pathway Gene Expression During Bioenergy Sorghum Stem Development” youtube.com/watch?v=XdramI…
The April cover of @NaturePlants features JGI-enabled research of one of the first cross-kingdom spatially-resolved transcriptomics studies. The symbiosis btwn plants & mycorrhizal fungi could improve carbon storage in soil and boost biofuel feedstocks! jgi.doe.gov/an-inside-look…
A great post on our @jgi metatranscriptomics survey of forest soil mycobiomes … Getting to the Bottom of Fungal Functions Across Earth's Forests - DOE Joint Genome Institute jgi.doe.gov/getting-to-the…
This year's #JGI2024 Annual Meeting is set for 9/30-10/4 at the Walnut Creek Marriott. See a recap of last year's meeting below, and stay up to date by signing up for our newsletter at jointgeno.me/newsletter ✅ jgi.doe.gov/recap-multi-om…
Dr. Jennifer Pett-Rid.. @Jeffinerca
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15 Followers 68 Following Research Associate in River's microbiome 🏞 and Anaerobic Digestion systems 🧬🦠 | Resilience |Jacob Wynne @Wynne776
64 Followers 208 Following PhD student at Oregon State University | Studying the microbiomes of Antarctic methane seepsLei Yu @LeiYu37
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341 Followers 309 Following Marine biologist and bioinformatician @UNSW Bacterial metabolism and life in the deep sea. Also, ✈️ enthusiast https://t.co/4tU2gJZd8BCameron Thrash @jcamthrash
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13K Followers 316 Following Environmental Microbiol meets Synthetic Biology in Southern Europe (opinions/pontifications are mine only). Long live P. putida 💪! #SinCienciaNoHayFuturoAlex Harkess @aeharkess
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15K Followers 5K Following Associate Prof at UArizona interested in genome rummaging and farm animals post = @surt_lab 🐘= @[email protected] “I’m something of a scientist myself”Mike Jetten @msmjetten
7K Followers 616 Following Professor in Microbiology at Radboud University NL, anammox, anaerobes metagenomics, research strategy, strategic recruitment, gender equality, SIAMLaszlo G. Nagy @laszlognagy
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497 Followers 1K Following We share & manage open Earth & environmental systems science #FAIRdata — official Twitter account of ESS-DIVE @BerkeleyLab, a U.S. Dept of @ENERGY natl lab.LBNL Engineering Divi.. @lbnlengineering
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2K Followers 323 Following Online community wiki sponsored by @microbiosoc & hosted by @JohnInnesCentre. Tools for studying Streptomyces. Contact [email protected] to get involvedJoseph Viviano @josephdviviano
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13 Followers 66 FollowingQSB Graduate Program .. @QSB_UCMerced
141 Followers 155 Following Quantitative & Systems Biology Graduate GroupLBNL Accelerator Tech.. @LBNLatap
747 Followers 697 Following Official account of LBNL's ATAP Division. Supporting @BerkeleyLab and DOE's mission by inventing particle accelerators to explore and control matter and energy.Tiny Expeditions Podc.. @ExpeditionsTiny
46 Followers 63 Following A podcast that explores the tiny science of genetics, DNA, and inheritance from @hudsonalpha. Season 4️⃣ is out now!Nick Talbot @talbotlabTSL
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400 Followers 1K Following Graduate student in Molecular microbiology with interest in the discovery of novel antimicrobials@BiologicalRese1Claudia Coleine @ClaudiaColeine
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794 Followers 246 Following Assistant Prof. Quantitative Geneticist at Auburn University. Plant Breeding, Genetics and Genomics for Sustainable Cropping Systems.Steven Wilhelm @TN_Marine_Micro
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233 Followers 720 Following Genomes, metagenomes, functional genomics, bacterial metabolism, #100KPathogenGenomes, skier, tennis player, cyclist, outdoors enthusiast, #BlackLivesMatterToMeErica Majumder @elmtree1111
266 Followers 290 Following PhD Biochemist, Assistant Professor at University of Wisconsin-Madison @UWBact #metabolomics #sulfur #anaerobes #plasticsLotus Lofgren @LotusLofgren
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150K Followers 7K Following Managing, sustaining, and protecting the health & productivity of Washington's lands and waters. 👤@Hilary_FranzCPL 🔥@WaDNR_Fire 🌲@waDNR_ForestsVlastimil Novak, PhD @VlastiNovak
103 Followers 233 Following Project Scientist @BerkeleyLab @Northenlab. I study the interactions between plant nutrients, root exudation, and soil microbes. #metabolomics #stableisotopesYingWang @ying_wang_19
142 Followers 311 Following Asst. Prof. @tamusoilcrop. Postdoc @northenlab @LBNLBioSci @BerkeleyLab. PhD @BrenUCSB. NJU alum.Maria Parazo Rose @mariaparazorose
343 Followers 373 Following reporter + spatial data analyst @grist | M.S. @MIT_SciWrite focused on Indigenous affairs, land rights, climate migration + resilience, justiceTravis Lawrence @phylophreak
101 Followers 286 Following PostDoc at @ORNL. Alum @UCMerced. Working on the ecological and evolutionary genomics of Sphagnum, plant and microbe diversity, and phylogenetics!Adriana Lopes dos San.. @A_LopesSantos
736 Followers 528 Following Latina, Carioca, 1st Gen college student, plankton ecologist, fascinated with Protists, Lead-PI of GeekLab, A/P at AQUA (@biovitenskap) & occasionally boxerCheckerspot @Checkerspot_
768 Followers 530 Following Est. 2016. B Corp™ A brighter future starts with a better source of oil.MSU-DOE Plant Researc.. @MSUDOEPlantLab
697 Followers 148 Following Research institute at @michiganstateu funded by @doescience Plant science driving innovation. #MSUPRLBerkeley Lab Research @LBNLresearch
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4K Followers 726 Following UChicago, the Marine Biological Laboratory, and Argonne National Laboratory - Collaborating to explore the power of microbes across environments.Balunas Research Grou.. @BalunasLab
3K Followers 1K Following #naturalproducts #hostmicrobe #symbioses @[email protected] @balunaslab at https://t.co/ARLppP1crI (with no idea how to really use either platform yet...)Megan Molteni @MeganMolteni
8K Followers 2K Following science writer @statnews | formerly @WIRED | she/her | genetic privacy & Crispr tips to [email protected] | DM for signalUwe Ohler @uwe_ohler
2K Followers 315 Following computational biologist & occasional singer. [classical] music nerd. @BIMSB_MDC @MDC_BerlinUpdate! I've relocated to the bay area to work at the @jgi with @simroux_virus focusing on bioinfo tools, RNA viruses and (I hope) making this research niche more interoperable 😉 Not easy leaving home at such a time, but I know it'll always be there 💙
🌍 This #EarthWeek2024, we're highlighting @BerkeleyLab research based on Earth's resources and elements, today's: hydrogen. EESA scientists are studying the potential of geologic hydrogen as a carbon-free energy source. Learn more: bit.ly/499p7ru
🏜️Have you ever done fieldwork in the desert? NMDC Champion Aaron Robinson has! He researches fungi in soil and plant-associated microbiomes all around New Mexico. Learn more and apply to our Champions Program: microbiomedata.org/community/cham… #FieldworkFriday #NMDC
This Saturday & Sunday, the CalNERDS community is inviting students to join their free Introduction to Python Programming Bootcamp. It is a very beginner-friendly virtual workshop. We hope to see you there! #CALNERDS #Pythonbootcamp #Coding
Meet Kent Pham, one of our 2024 Ambassadors! To learn more about our NMDC Ambassador cohort, visit our Ambassador page at microbiomedata.org/ambassadors/
Three Berkeley Lab Scientists Elected to the American Academy of Arts and Sciences: newscenter.lbl.gov/2024/04/24/thr…
Today, @Livermore_Lab and @SandiaLabs hosted an #EarthDay celebration featuring a plant exchange, activities, vendors and hardworking therapy doggos from @ValleyHumaneSoc.
I had an incredible experience attending the MGM Workshop at @jgi this past week. Huge thanks to the instructors and organizers for putting together such an informative and engaging workshop. The hands-on training on the IMG/M platform and analysis workflows was top-notch. 🙏
Happy to see this work finally out! A great collaboration with Marie-Agnès Jacques, Jeff Jones, @VinatzerLab, Tal Pupko, and @jgi! academic.oup.com/gbe/article/16…
Having a great time at the Microbial Genomics & Metagenomics Workshop (MGM-32) hosted by @jgi, at Lawrence Berkeley National Lab (LBNL). Many powerful bioinformatics tools for studying soil biodiversity and searching for microbial traits, including metagenome SIP Projects 0/
We are thrilled to partner with @uhmanoa on a 3-year @doescience RENEW initiative to provide students from historically underrepresented institutions with hands-on experimental opportunities at our state-of-the-art facilities. @BerkeleyLab @ENERGY atap.lbl.gov/atap-collabora…
Just dropped! The #KBase Community Update from January through March is up on our News page. Find it here ➡️ kbase.us/news/q1-2024/.
Deadline today: Apply to participate in the #2024EMSLSummerSchool (July 22-26): emsl.pnnl.gov/2024EMSLSummer… @EMSLscience will cover travel & hotel costs for up to 25 students or postdocs. Participants can nominate one protein target to work on during the summer school.
"Additionally, they discovered diverse viral communities and uncovered 13 types of AMGs that help regulate the metabolisms of their host."
"Our team sought to answer how much of the 'microbial metabolism' viruses are actually manipulating during infection." -Matt Sullivan @Lab_Sullivan on @NatureComms work enabled in part by FICUS @jgi @EMSLscience. @doescience news.osu.edu/microbial-viru…
We are home to many cutting-edge facilities—the @jgi provides integrative genome science capabilities. Researchers in need of #genomics tools to answer questions related to #bioenergy or #environmental issues should check out their proposal calls! ⬇️ jointgeno.me/proposals
A nice description in Science magazine by Liz Pennisi of the major results from our paper (@LFelipeB @timstep1383 @CouchMicroscopy @jgi) on Yellowstone National Park viruses can be found here, science.org/content/articl… (@RutgersSEBS @RutgersU_News @PSAAlgae @RutgersNJAES)
Join us in welcoming the latest @doescience Science Undergraduate Laboratory Internships (SULI) students who are benefitting from our world-renowned experts and state-of-the-art facilities on their path to a career in #STEM. @BerkeleyLab @ENERGY atap.lbl.gov/science-underg…
Today’s seminar: @FR_LucasAuer on #Forest #soil #metatranscriptomics: a long journey in #bioinformatics
GLBRC researchers at UW-Madison have found a way to efficiently make one of the most popular pain killers out of poplar trees, making the process cost competitive with fossil fuels, the primary driver of climate change.🌳💊🌏
Try saying "Popular pain reliever from poplars not petroleum" five times fast. Thanks to researchers @UWEnergy and @GLBioenergy, the pharmaceutical, acetaminophen, can be made efficiently from a greener source than the traditional one, fossil fuels. news.wisc.edu/uw-madison-res…