M. Mathis Laboratory @EPFL @mwmathislab
Merging artificial and natural intelligence to study adaptive mechanisms | CV, ML, Neuro | PI: @trackingactions 🦄🐭🧠💻.y.at @EPFL 🇨🇭 Joined June 2017-
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𝗙𝗶𝗻𝗮𝗹𝗹𝘆 𝗽𝘂𝗯𝗹𝗶𝘀𝗵𝗲𝗱 𝗶𝗻 @CellCellPress ! How does the brain processes proprioceptive information?🧠 We use a task-driven modeling approach by combining biomechanics 🦾 and neural network modeling💻 to investigate different hypotheses. 1/N cell.com/cell/pdf/S0092…
Have you tried #CellSeg3D yet for automating your 3D lightsheet microscopy analysis? We just hit >75K pip installations! 🥳 We have some 🔥 coming soon ... but in the meantime, github.com/AdaptiveMotorC… lead by @AChRD4 @Neuro_X_EPFL
🥳 A big congrats to masters student/incoming @ICepfl PhD student @NasFilippova who just started an internship at @Apple in CA ☀️ 🌊 The lab is so proud of you 💪 See you in the fall 🔥😎
🥳A little delayed, but huge congratulations to the labs very first PhD grad, 🎓Dr. Steffen Schneider @stes_io who was also an @ELLISforEurope PhD w/@bethgelab ❤️ We are so proud he just started his own lab this month at @HelmholtzMunich ➡️ dynamical-inference.ai
🎉 Beyond thrilled to be awarded an @snsf_ch grant with/@TrackingPlumes! This work will push our development of joint modeling of behavioral & neural dynamics during naturalistic behavior! Watch out @DeepLabCut & @cebraAI 🔥— new developments coming for you! We are hiring!
Happy International Women’s Day! A huge shout out to the women both past and present from/in the lab! 🙌🥳 👩🔬 Shout out to current amazing women lab members: Laure, @TheVetFuturist, @NasFilippova, @celia_bqt, and Mariia!
The Hertie Foundation & #FENS present Eric Kandel Young #Neuroscientists Prize Winner & #FENS2024 Special Lecture Speaker Mackenzie Mathis! Find out more about her research: loom.ly/Q_m95o8 @TrackingActions @EPFL_en @demokratieghst
The new band album has dropped 🔥aka the lab photo for 2024 @mwmathislab #AdaptiveIntelligence @epflSV mackenziemathislab.org Want to join us? We are hiring postdocs and software engineers 🎉…
🚨Crowded scenes are notoriously difficult for #ComputerVision models. In our new work lead by @zhoumu53 & @LStoffl we developed a novel approach called BUCTD that is state-of-the-art on crowded 🐒🐠&🕺human pose estimation benchmarks!🔥 arxiv.org/abs/2306.07879 #CVPR2023 workshop
🐁💜#deeplabcut+🦓🖤#CEBRA = 🔥 @mwmathislab show you can use @cebraAI with only neural data, only behavior data (#CEBRA supports loading your @DeepLabCut data 👀), and powerfully combine data for rich metrics & insights into neural population dynamics nature.com/articles/s4158…
🐁💜#deeplabcut+🦓🖤#CEBRA = 🔥 @mwmathislab show you can use @cebraAI with only neural data, only behavior data (#CEBRA supports loading your @DeepLabCut data 👀), and powerfully combine data for rich metrics & insights into neural population dynamics nature.com/articles/s4158… https://t.co/bXNwaVcetE
Follow our DLC Community Manager to get your holiday fill of 🔥💜🤩
Follow our DLC Community Manager to get your holiday fill of 🔥💜🤩
NeuroAI Meeting at CSHL! Sept 28-Oct 4, 2024. Save the date! And retweet @doristsao @tyrell_turing @evadyer @s_y_chung @TrackingActions @realAKoulakov @alonamarie @computingnature @AToliasLab @dyamins meetings.cshl.edu/meetings.aspx?…
A Swiss lab run by @TrackingActions is collecting data from mouse brains and using it to inform AI systems. More on Hello World with @ashleevance: youtu.be/HqnAU-dybhU
Huge congratulations to my labs very first PhD 🎓🥰 🥇Dr. Steffen Schneider @stes_io who’s also an @ELLISforEurope PhD w/@bethgelab ❤️ @EDNE_EPFL @mwmathislab I’m so incredibly proud that now he starts his own lab at @HelmholtzMunich ➡️ he’s recruiting! dynamical-inference.ai
🥰 After 6 years - first at the Rowland @Harvard and now at @EPFL_en - time to unveil our new lab logo! A great way to celebrate the end of an incredible 2023 with amazing people! #deeplabcut #cebra #amadeusGPT Thanks to @mulesome for the excellent design work 💜💙❤️
🧠 Thrilled to be part of NARS2023, the Neuro X Annual Research Symposium hosted by @Neuro_X_EPFL ✨! Delving into the latest in neuroscience, and exploring groundbreaking research🔬. 🚀 @mwmathislab is showcasing some of its latest research work.
Mackenzie Mathis, PhD @TrackingActions
20K Followers 12 Following Scientist merging adaptive motor control & machine learning | 🐭@deeplabcut 🦓@cebraAI | @ELLISforEurope Scholar | (same @ on bluesky)
Kording —-& Lab �.. @KordingLab
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Kay M Tye PhD @kaymtye
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Andrew Pruszynski @andpru
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Kanaka Rajan @KanakaRajanPhD
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DeepLabCut 🦄 @DeepLabCut
10K Followers 4 Following Python package for markerless pose estimation 4 animals (including humans) | free, open code | dev by @mwmathislab @amathislab
Patrick Mineault @patrickmineault
19K Followers 3K Following Neuro AI, vision, Python, open science. Senior ML scientist @ Mila. Previously engineer @ Google, Meta. Updates from https://t.co/d0o7cSLC6o, https://t.co/duh0cFwLyw
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Tony Zador @TonyZador
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Zoe McElligott (since.. @nanopharmNC
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Catherine Dulac @DulacLab
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Guido Meijer @guido_meijer
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Shelly Pal S. @shellyghosh071
145 Followers 1K Following An aspiring neuroscientist, poet, food fan and firm believer in God,😊😊😊🧠🧠🧠🤘🤘 Researcher at @Universityofhaifa
Yuan @Yuan33941934836
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Hideaki Miyauchi @roba68no33
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Jonas Grunenberg @JonasGrunenberg
20 Followers 97 Following Master student in behavioral and neural biology (DNB Göttingen/ DPZ) - Interested in primate behavior/cognition, data science, programming/automation, marmosets
Gabeff Valentin @GabeffValentin
35 Followers 39 Following PhD Student @EPFL with @amathislab and @DevisTuia Studying the relationship between wildlife and its environment in the Swiss Alps with AI and Computer Vision.
Khanyi Mfundo Dube�.. @KhanyiDube4
244 Followers 6K Following If it is not for the money, do it for the lolz.
(neuro)mechanic @neurovchenyy
44 Followers 234 Following Ph.D. Candidate | West Virginia University | Neural Engineering Lab | #physiology #neuromechanics #motorcontrol ☯︎
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Tingting Wang @WanglabTingting
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Marija Nedeljković @maja_nn
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Cesar Caballero.exe @Neuro7Cesar
0 Followers 7 Following Psychologist and master's degree student in Neurobiology 🧠 at @UNAM_MX // Science Communicator // Spanish and English //CONTACT: [email protected]
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Sarah Gorkiewicz @GorkiewiczSarah
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14 Followers 100 Following Focusing on deciphering sensorimotor transformation neural circuits#a potential PhD candidate
Andrés de Vicente @andrestrocyte
395 Followers 877 Following MD @UV_EG | BIF PhD Fellow in Systems Neuroscience @fmiscience Lüthi Lab. Amygdala🧠, circuits & behavior🐭🔀, Brain-Machine Interfaces🦾, decision-making.
Marius Mählen @MahlenMarius
105 Followers 256 Following Former med - now PhD student in the Liberali lab. Loves microscopy, cooking and nerd jokes.
Seyed Mohammad Hossei.. @semohhosseini
8 Followers 301 Following
Akshay Varu @akshayvaru1003
73 Followers 5K Following Data Scientist turned Biologist Doing MSc in Stem Cell Biology @ MIRM-MAHE working on Multiomics
えりこ (梦想杰) @ejrihco
28 Followers 321 Following Half-asses everything, with everything I've got. Math Major? 🦅 #ScienceForThePeople
Junhao Liang @Junhao_Liang
178 Followers 661 Following PhD Candidate at Tsinghua University | Working on 🔬computational pathology, deep learning and microscopes | Table tennis fans🏓
mesoSPIM: Clear Image.. @MesoSpim
3K Followers 548 Following We build light-sheet microscopes for imaging cleared tissues. We share open-source and free. Run by @nvladimus and @voigtvision.
Brandon Hughes PhD @BrandonHughes90
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637 Followers 900 Following Post-doc in @CarlsonLab_Yale. Insectophile. Sensory Neurobiology. Social Media Coordinator for @CSHLflycourse. #FirstGen. He/Him. Opinions are my own.
Tim C. Pearce @tcp112
152 Followers 897 Following olfaction, neuroscience, machine learning, AI. My opinions only. Head of Biomedical Engineering Research Group https://t.co/MeDCmSSv3U
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25 Followers 242 Following
Adrian Valente @lowrank_adrian
1K Followers 2K Following I'm a small dynamical system, trying to make sense of a bigger dynamical system. Previously Phd student with @srdjan_ostojic, in search of a new home.
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Youssef Ghallab @Yousif_Ghallab1
438 Followers 3K Following Researcher| Neuroscience& computational biology|BSc in Biotech.&Genetic Engineering @Ainshams_Univ| Postgrad in Clinical Bioche&Applied Micro.@ZagazigUniv |9¾⚯͛
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HOSSEIN @hsirm96
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Zachery Morrissey, Ph.. @zdmorrissey
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Omiros Pantazis @panom1
113 Followers 327 Following PhD candidate at @UCL. Research focus on the intersection of #computer_vision and #biodiversity_monitoring. Part of the @Biome_Health project.
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272 Followers 893 Following Living systems and music! Graduate Researcher | Prakash Lab | Department of Bioengineering, Stanford University
Mackenzie Mathis, PhD @TrackingActions
20K Followers 12 Following Scientist merging adaptive motor control & machine learning | 🐭@deeplabcut 🦓@cebraAI | @ELLISforEurope Scholar | (same @ on bluesky)
DeepLabCut 🦄 @DeepLabCut
10K Followers 4 Following Python package for markerless pose estimation 4 animals (including humans) | free, open code | dev by @mwmathislab @amathislab
🦓CEBRA @cebraAI
2K Followers 7 Following 🦓 Consistent EmBeddings of high-dimensional Recordings using Auxiliary variables | pip install cebra
Célia Benquet @celia_bqt
45 Followers 227 Following 🧠 Comp Neuro PhD student @mwmathislab | @Brainmind_EPFL | @ELLISforEurope
Markus Frey @CYHSM
503 Followers 328 Following PhD candidate in the labs of @doellerlab & @caswellcaswell | PostDoc with @TrackingActions | 𝗖lap𝗬our𝗛ands𝗦ay𝗠arkus
Anastasiia Filippova�.. @NasFilippova
122 Followers 387 Following EPFL🇨🇭@mwmathislab upcoming @ELLISforEurope Phd in NeuroAI🧠 MLR intern @Apple 🍎
Cyril Achard @AChRD4
33 Followers 29 Following Master student in NeuroX at EPFL Maintainer of the cellseg3d plugin for napari
Rodrigo GL @rgonzalezlaiz
294 Followers 2K Following Phding at https://t.co/ipb2GqKpDK with @stes_io. Prev stats @ ETH Zurich & @mwmathislab
Timokleia Kousi @TheVetFuturist
338 Followers 721 Following Passionate veterinarian🐾merging animal sciences and⚡️technology. 🔬Research work @EPFL_en 🐭 @DeepLabCut Previous: @EU_HaDEA - @UNIGEnews alumni #VetFuturist
Shaokai Ye @shaokaiyeah
164 Followers 148 Following PhD student at MathisLab Bridging AI and neuroscience!
Jessy Lauer @jessy_lauer
139 Followers 3 Following Biomechanist | Postdoctoral fellow @mwmathislab | @deeplabcut co-developer
Sebastien Hausmann @SebHausmann
243 Followers 195 Following Neuroscience PhD Candidate @mwmathislab @EPFL_en | M.S. in Tye Lab @salkinstitute | @EPFL_en Neuroengineering alumnus
Steffen Schneider @stes_io
979 Followers 945 Following Dynamical Inference @HelmholtzMunich. 🦓@CebraAI. Co-Founder @KImachtSchule & @KinematikAI. ➡️ Hiring PhD students & SWEs!
tom sainsbury @sainsbury_tom
424 Followers 391 Following Postdoc at the Mathis lab, Geneva. Trying to figure out the neural mechanisms underlying adaptive motor control.The @DeepLabCut community has been a great resource 💻 To contribute, I made a tutorial on setting up their GUI with @GoogleColab for tracking movements—no GPU required. #OpenScience #Academia youtu.be/J4gv31MU_PI
in this work, we take a different approach, using Hidden Markov Models to identify common ‘motor patterns’ present across a cohort of 12-18 week infants based on markerless movement tracking from smartphone videos with @DeepLabCut
本コンソーシアムのメンバー執筆の論文が，2024年3月に公開されました． 深層学習を用いたコオロギの姿勢や行動の解析について調査されました． コオロギの概日リズムの解明に資する一報です． #コオロギ #研究 #論文 #概日リズム #深層学習 #deeplabcut journals.biologists.com/bio/article/do…
#農工大 鈴木丈詞教授らは、深層学習をベースとしたソフトウェアの「DeepLabCut」を活用することで、コオロギの「動く」「食べる」「眠る」それぞれの行動を個別かつ同時に定量化するシステムを構築しました。昆虫の日周リズム研究の新展開が期待できます！ tuat.ac.jp/outline/disclo…
コオロギの「動く」「食べる」「眠る」の同時解析システムを構築【早稲田大学】 #早稲田大学 #早稲田 #早大 #深層学習 #DeepLabCut #コオロギ #日周リズム #睡眠 #昆虫 kyodonewsprwire.jp/release/202404…
How can #metamaterials be leveraged in soft #pneumatic #actuators? MSc student Oscar Ochoa is trying to get some answers to this. Here an automated experimental setup. Tracking by DeepLabCut, #deeplearning toolbox for pose estimation for animal and #softrobots? @IngenieriasTec
🦗 Spent sometime this weekend reading a study where @DeepLabCut was used to reveal the nuanced daily rhythms of crickets, from sleep to snack time. 📚have a look here: journals.biologists.com/bio/article/do… @BiologyOpen
What is the integrative logic of proprioception? Sensory information is collected in muscle spindles distributed in the body, but how is the information integrated. We took a computational approach to this problem... cell.com/cell/fulltext/…
Super proud of you!
𝗙𝗶𝗻𝗮𝗹𝗹𝘆 𝗽𝘂𝗯𝗹𝗶𝘀𝗵𝗲𝗱 𝗶𝗻 @CellCellPress ! How does the brain processes proprioceptive information?🧠 We use a task-driven modeling approach by combining biomechanics 🦾 and neural network modeling💻 to investigate different hypotheses. 1/N cell.com/cell/pdf/S0092…
Stopped by @harvardbrainsci to talk science with @DulacLab. Had a really fun conversation spanning many areas of science and had a delicious lunch!!!
𝗙𝗶𝗻𝗮𝗹𝗹𝘆 𝗽𝘂𝗯𝗹𝗶𝘀𝗵𝗲𝗱 𝗶𝗻 @CellCellPress ! How does the brain processes proprioceptive information?🧠 We use a task-driven modeling approach by combining biomechanics 🦾 and neural network modeling💻 to investigate different hypotheses. 1/N cell.com/cell/pdf/S0092…
Have you tried #CellSeg3D yet for automating your 3D lightsheet microscopy analysis? We just hit >75K pip installations! 🥳 We have some 🔥 coming soon ... but in the meantime, github.com/AdaptiveMotorC… lead by @AChRD4 @Neuro_X_EPFL
I want to thank @TrackingActions and many other people from the @amathislab and @mwmathislab that gave us constant feedback and support.
@mwmathislab @ICepfl @Apple Thank you!!❤️
🎉 Beyond thrilled to be awarded an @snsf_ch grant with/@TrackingPlumes! This work will push our development of joint modeling of behavioral & neural dynamics during naturalistic behavior! Watch out @DeepLabCut & @cebraAI 🔥— new developments coming for you! We are hiring!
Terrific new study by Alexander Mathis @TrackingPlumes uses modeling to crack the code of proprioception - how we are cognizant of the position and movements of our body. cell.com/cell/fulltext/…
🎉 Happy to share my internship project @GoogleDeepMind 🗼 – purely text-trained LLMs can act as evolutionary recombination operators 🦎 🧬 Our EvoLLM uses LLM backends to outperform competitive baselines. Work done w. @alanyttian & @yujin_tang 🤗 📜: arxiv.org/abs/2402.18381
Out today in @NatureBiotech! PhD students & postdocs: there's a trick – overlooked and underused – for having new ideas in the creative process. Talk science 1 on 1 with a science buddy that you trust and think of it as an improvisation. nature.com/articles/s4158…… @MartinJLercher
Makes me nostalgic for learning from conversations between @arvind_rasi and @ZidLab in the back bay of the O'Shea lab... and these days I have to thank @chidley_chris for "yes-ing" all of my worst ideas, 24-7, coffee or no coffee (decaf 😄)
Out today in @NatureBiotech! PhD students & postdocs: there's a trick – overlooked and underused – for having new ideas in the creative process. Talk science 1 on 1 with a science buddy that you trust and think of it as an improvisation. nature.com/articles/s4158…… @MartinJLercher
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