Josh Quick @Scalene
UKRI Future Leaders Fellow, Institute of Microbiology and Infection, University of Birmingham. @scalene.bsky.social Birmingham Joined February 2009-
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Josh Quick retweeted
Looking forward to #ASMicrobe this year!🦠 We've got some great @nanopore events lined up, including an exciting Evening event Friday, June 14th with some of the legends @Scalene, @rrwick, @anna_cusco, @Matt180KDa! Filling up fast, so be sure to register: nanoporetech.com/about/events/c…
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Josh Quick retweeted
First MinION Mk1D sequencing run out in the field! @nanopore #nanoporeconf #10yrsON Taking the sequencer to the samples not the sample to the sequencer.
New round of Future Leaders Fellowships announced: bit.ly/2m16WSb Top researchers and innovators from across the country will receive a portion of a £78 million #UKRIFLF cash boost. @Scalene from @unibirmingham is one of our fellows:
Job alert 🚨 Research fellow in wastewater surveillance at the University of Birmingham working with myself and @pathogenomenick jobs.ac.uk/job/DFY639/res… This is a read-only post so please email if you have any questions.
Josh Quick retweeted
Thank you to the Asia PGI for hosting @NetworkArtic as trainers for the first @nanopore sequencing workshop. Amazing teams, flu libraries and metagenomic trouble shooting 🦠🧬🕵️
@PeacockFlu @JosetteSchoenma @theosanderson Yes sequence should start at base 79 for v5.3.2
@bioinfomatt @AlexKneubehl @Psy_Fer_ @NetworkArtic @pathogenomenick It's to distinguish between other primers which have been used for that region previously e.g. if you are pooling your own primers.
Josh Quick retweeted
Only at #CINEMAParis, live @nanopore sequencing run of a zymo mock microbiome by @Scalene next to lighting talk session🔥 We will dive into bioinformatics methods for environmental and clinical microbiome analysis over the next few days ! (Ps. @Scalene said it was a good run!)
Josh Quick retweeted
PM Day 3 of #imisummerschool2023: Dr Hung-Ji Tsai guided us through the potential reasons for the dinosaurs' demise (clue: recreational fungi were implicated), followed by Dr Josh Quick who took us on a whistle stop tour of Nanopore sequencing. @HJTsai @Scalene @UoBSchool
Last call for this PhD position on wastewater surveillance, closes Friday! findaphd.com/phds/project/p…
If you're at #LC23 check out @chriken_ poster on primer design algorithms!
Josh Quick retweeted
If I was looking for a PhD right now I'd absolutely apply for this awesome looking one with Josh Quick @Scalene on using nanopore sequencing for pathogen surveillance in wastewater! @IMIBirmingham @UoBbiosciences 🤩 findaphd.com/phds/project/p…
10M reads (N50 30.4kb) on the first run - just time to squeeze in some of our samples before #LC23
We are very excited to have the very first P2 right here in Birmingham. Thanks to all at @nanopore for making it happen!
@mattloose @nanopore That's OK I wanted to sequence Lambda
@chrisnrg @mattloose You are both welcome anytime!
Josh Quick retweeted
@adampeltan @Scalene @NetworkArtic @DrCJ_Houldcroft Full list now available on the ARTIC blog: community.artic.network/t/artic-multip…
@DrCJ_Houldcroft @adampeltan @NetworkArtic @AnnaKov1988 @igoodfel @PostdocPat No but I've been meaning to add a full list to the blog so I will try and do that.
@Amandatron89 @beconstant @pvanheus @chriken_ I'm just readying a blog post on the new ARTIC v5 primers
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