Karina-Doris Vihta @KarinaVihta
Postdoc in AI for Infectious Diseases, University of Oxford Training for life - mind and body Joined November 2017-
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Now peer-reviewed! "Diversity of symptom phenotypes in SARS-CoV-2 community infections observed in multiple large datasets" - we consider multiple large datasets to consider the diverse ways COVID symptoms co-occur. nature.com/articles/s4159…
Diversity of symptom phenotypes in SARS-CoV-2 community infections observed in multiple large datasets nature.com/articles/s4159… @MartynFyles @TAH_Sci
Predicting future hospital antimicrobial resistance prevalence using machine learning medrxiv.org/cgi/content/sh… #medRxiv
It's World Antimicrobial Awareness Week! #WAAW #WAAW2022 #WorldAntimicrobialAwarenessWeek #AMR #AntibioticResistance #antimicrobialResistance @HPRU_amr @NDMOxford
Next-up - Karina-Doris on Iterative sequential regression for real time surveillance of infectious diseases
A taster from the 2nd of the 8 lecture 'Introduction to University Mathematics' course that our students take at the outset of their @OxUniMaths life, as we prepare them for the step up from high school. You can watch lecture 2 here. We are showing all 8. youtube.com/watch?v=UCev1n…
"Symptoms and SARS-CoV-2 positivity in the general population in the UK" published in CID academic.oup.com/cid/advance-ar… @ModMedMicro @NicStoesser @pippa_matt @kb_pouwels
I know currently, and rightly so everything is focused on Coronavirus, but am glad this paper finally made it out (albeit through a rocky course) TY @stat_sarah @NicStoesser and all my colleagues who helped with this, and keep safe! aac.asm.org/content/early/…
Our work on the effectiveness of COVID-19 vaccines against infections with the Delta and Alpha variant is now published nature.com/articles/s4159…. Protection by two doses of Pfizer (BNT162b2) or AstraZeneca (ChAdOx1) better or similar to previous infection, respectively. However,
Pleased to see our study estimating the effectiveness of Pfizer and AstraZenaca vaccines against infections overall, (a) symptomatic infection, and viral burden. Great work from @emmapritchy using ~2 million swabs taken independent of vaccination/symptom status.
Pleased to see our study estimating the effectiveness of Pfizer and AstraZenaca vaccines against infections overall, (a) symptomatic infection, and viral burden. Great work from @emmapritchy using ~2 million swabs taken independent of vaccination/symptom status.
Very pleased this is out today in @GenomeMedicine genomemedicine.biomedcentral.com/articles/10.11…
Very pleased this is out today in @GenomeMedicine genomemedicine.biomedcentral.com/articles/10.11…
Symptoms and SARS-CoV-2 positivity in the general population in the UK medrxiv.org/cgi/content/sh… #medRxiv
2 major studies from @ONS Covid Infection Survey (370k people) - 72% reduction in symptomatic infection after 1 dose of either Pfizer or AZ vaccine, 90% after 2 doses of Pfizer. Strong rises in antibodies after 1 dose of either medrxiv.org/cgi/content/sh… and medrxiv.org/cgi/content/sh…
Fantastic data showing 65% reduced chance of catching Covid from 1 dose of both Oxford and Pfizer vaccines. Vaccines are our way out. bbc.co.uk/news/health-56…
Brilliant work from my colleagues @oxengsci CHI Lab and the @OxfordEmergeMed @Ravi_PShetty - #AI test rules out a COVID-19 diagnosis within one hour in emergency departments #ML4health #COVID19 #data4good #machinelearning healthcareitnews.com/news/emea/ai-t…
Ongoing analysis of @OUHospitals healthcare workers shows #COVID19 antibodies fall by half in under 90 days, and faster in younger adults and those without symptoms oxfordbrc.nihr.ac.uk/covid-antibodi… @drdavideyre @KatieJeffery10 @Oxford_NDPH
Viral load in community SARS-CoV-2 cases varies widely and temporally medrxiv.org/cgi/content/sh… #medRxiv
Community prevalence of SARS-CoV-2 in England during April to September 2020: Results from the ONS Coronavirus Infection Survey medrxiv.org/cgi/content/sh… #medRxiv
Antimicrobial resistance surveillance: can we estimate resistance in bloodstream infections from other types of specimen? medrxiv.org/cgi/content/sh… #medRxiv
Jordin Villarreal @JordinVill58471
113 Followers 3K Following
Thomas House 热爱�.. @TAH_Sci
6K Followers 974 Following Professor of Mathematical Sciences. Views own & open for revision. Mainly COVID plus other modelling & data science in health.
Ben Ogorek @BenOgorek
661 Followers 526 Following Statistician. Creator of Chrome extensions "XCoach" for timed @X sessions and daily stats, and "TextLinks" for mnemonic URL bar quick links. Free in the store.
Teresa Street @tree_street
105 Followers 196 Following Molecular microbiologist. Lecturer in Genetics. Mum of a coeliac. Part of team @ModMedMicro @UniofOxford @Oxford_HumSci
James Kavanagh (they/.. @j_kavanagh20
81 Followers 386 Following (they/them) PhD student in paediatric infectious diseases with an interest in evolutionary medicine and diagnostics 🏳️⚧️🏳️🌈 #BiInSci
Carla Wright @koolcarlamae
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Lab76 @Lab767
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Nithyanan Annamalai @BlackSamrat
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Thanaphol Jitsongkram @Thanaphol_J_
69 Followers 5K Following @Heartbeach__ @Pinminimart Suratthani School 106 Thammasat University 84 University of Oxford 1149
Prof. Dr. Md. Tanvir .. @tanvirahman
2K Followers 5K Following Professor, Department of Microbiology and Hygiene at Bangladesh Agricultural University (https://t.co/i94DzlG2Hu).
PATHDET @pathdet
41 Followers 182 Following PATHDET is a web application for “PATHogen DETection” from extracellular DNA/RNA via high-throughput sequencing data for infectious diseases. Dev by @cikazda.
Jiandong ZHOU @JdongZhou
35 Followers 79 Following Assistant Professor, University of Warwick; Way for good life - mind and body on the way! 🇨🇳🇭🇰🇬🇧
Ana Luíza Gibertoni .. @AGibertoniCruz
177 Followers 608 Following
Forest Pathology UVa @forestpatuva
357 Followers 356 Following Bienvenidos al grupo oficial de Patología Forestal de la Universidad de Valladolid 🌲🔬 | Welcome to the Forest Pathology group of the UVa | @youngforesters
James Kavanagh @JamesKavanagh
289 Followers 902 Following (he/they) PhD student in infectious diseases with an interest in evolutionary medicine and diagnostics 🏳️⚧️🏳️🌈 #BiInSci new account - @j_kavanagh20
Dr Justine Rudkin @ScouseMicrobe
2K Followers 896 Following Lecturer of Bacteriology, Uni of Glasgow. Bacterial Virulence, Host-Pathogen-Microbiome Interaction. Editor, Access Microbiology. @scousemicrobe.bsky.social
Catrin Moore @catmoore_1
1K Followers 1K Following Microbiologist in global health. Passion for tackling #AMR in LMICs. Interest in AMR policy. Co-chair @microsoc impact and influence committee. WHO advisor MIA.
Bernadette Young @BugsBernadette
936 Followers 755 Following Transplanted Melbournian, now adapted to Oxford clay. Infection doctor and academic
Sam Lipworth @SamLipworth
551 Followers 1K Following Clinical Research Fellow in infection @UniofOxford. Also choral singer and orchardist.
Engineering Science, .. @oxengsci
6K Followers 774 Following The only official twitter page for The Department of Engineering Science at the University of Oxford.
Sheila Lumley @SheilaLumley
198 Followers 579 Following Infectious diseases registrar and Wellcome PhD training fellow
Philippa Matthews @pippa_matt
2K Followers 3K Following #Infection doctor 🦠🧬 #HBV research @TheCrick @UCLHResearch Global health 🌍, Equity in #STEMM. Double mum 💕 #European #BlackLivesMatter My own views
Paul Turner @PaulTurnerMicro
682 Followers 296 Following Professor of Paediatric Microbiology | Director, Cambodia-Oxford Medical Research Unit, Angkor Hospital for Children | Sometimes more about guitars than bugs
Kevin Kaibond Chau @KaibondChau
121 Followers 88 Following Postdoc Bioinformatician, Wastewater AMR connoisseur, Sewage sommelier, Molecular microbiologist, Duck enthusiast
Zamin Iqbal @ZaminIqbal
10K Followers 7K Following Professor of Algorithmic and Microbial Genomics at the University of Bath; Group Leader EMBL-EBI. Pathogens, genomics, genome graphs, antibiotic resistance
Ioana Bica @IoanaBica95
2K Followers 714 Following Research Scientist @GoogleDeepMind | Board of Directors @WiMLworkshop | Ex PhD Student @UniofOxford,@turinginst and @cambridge_cl BA & MPhil
Amy Mason @amymariemason
569 Followers 626 Following Researcher @CAMBRIDGE_CEU | Uses DNA 🧬& Stats 📊 to help hearts ❤️ & brains 🧠 | P/t with Fibro 👩🦽 | Loves LARP 🧙⚔🤖 | Scicomm 👩🔬👩🎤🃏 | She/her
Kumeren Govender @kumiGov
397 Followers 737 Following Chief Scientific Officer at GPAS | Co-Founder at Mable (Acquired) | MD | DPhil (Oxon) | Researcher at Oxford | Rhodes Scholar
Emma Pritchard @emmapritchy
76 Followers 113 Following Second year DPhil/ medical statistician at @UniofOxford. Also working with @ONS on the COVID-19 Infection Survey. All opinions my own.
Timothy Davies @TimJDT
92 Followers 269 Following New dad, medic , mathematician and PhD student in infectious diseases @UniofOxford, @OUHospitals, Views my own
Koen B Pouwels @kb_pouwels
492 Followers 300 Following Health economist with an interest in AMR at University of Oxford. All views are my own.
Yifei Xu @Yifei_m_Xu
74 Followers 169 Following Bioinformatician works on Nanopore solution for viruses
Bede Constantinides @beconsta
1K Followers 4K Following Pathogen genomics & data standards | bioinformatics @nanopore l visitor @ndmoxford | @[email protected]
Aleks Majak @Alexandra_Majak
749 Followers 2K Following PhD student in modern literature at @NewCollegeOx @UniofOxford | Alumna of comp lit at @Cambridge_Uni RT & own views |
Tjibbe Donker @TjibbeD
473 Followers 344 Following Infectious Diseases Modeller at University Hospital Freiburg | Antibiotic resistance | Hospital-acquired pathogens | Patient referral networks
Nicholas Sanderson @nickdsandy
340 Followers 530 Following Bioinformatician interested in infection and immunity. Direct from sample sequencing for diagnostics. Member of @ModMedMicro
Katie Jeffery @KatieJeffery10
962 Followers 651 Following Consultant in Clinical Infection, IPC Doc and DIPC. Assoc Professor Microbiology and Hospital Epidemiology, Oxford Uni. She/her.
Danny Wilson @apemandan
1K Followers 325 Following Professor of Infectious Disease Genomics, University of Oxford, Big Data Institute, Oxford Population Health and Department for Continuing Education
Sarah Earle @SGEarle
169 Followers 161 Following
Resistance is Futile @ResistanceIF
47 Followers 16 Following Twitter feed for the Modernising Medical Microbiology group at the University of Oxford - Resistance is Futile at the Royal Society Summer Event.
Leanne Barker @LeanneB63734964
2 Followers 8 Following
David Eyre @drdavideyre
2K Followers 222 Following Professor of Infectious Diseases, University of Oxford. Infectious Diseases and Microbiology Clinician.
Philip Fowler @philipwfowler
1K Followers 1K Following Scientist developing methods to predict antibiotic resistance. Helping @_gpas_ grow. @ModMedMicro https://t.co/fFEn2e7vLC
Max Roser @MaxCRoser
287K Followers 1K Following Data to understand global problems and research to make progress against them. Founder of @OurWorldInData / Professor at @UniofOxford's @BlavatnikSchool
Wobi @WobiDr
526 Followers 2K Following Oxford & Imperial Grad, Neuroscience Ex Radiologist.Fellow @NHS Institute for Innovation & Improvement.Founder at Tonus HS.Alum. Director, writer
Simon Rasmussen @simonrasmu
1K Followers 936 Following Translating complex biological data to understanding and insights. Genome, proteome, microbiome, clinical and registry data. @NNFCPR @UCPH_health
Zoubin Ghahramani @ZoubinGhahrama1
24K Followers 615 Following VP Research, Google DeepMind, ex-head of Google Brain. Professor at University of Cambridge. Machine Learning Researcher. ex-Chief Scientist & VP of AI, Uber.
Jürgen Schmidhuber @SchmidhuberAI
107K Followers 0 Following Invented principles of meta-learning (1987), GANs (1990), Transformers (1991), very deep learning (1991), etc. Our AI is used many billions of times every day.
Dave Kale NOW at @dav.. @davekale
2K Followers 910 Following @literati #DataScience leader | ex @Netflix @USC_ISI @StanfordSymSys | @teresakale's biggest fan | father, runner, #Tolkien pundit | he/him/his | views my own
Zachary Lipton @zacharylipton
59K Followers 2K Following Professor: CMU/@acmi_lab, CTO / CSO: @AbridgeHQ, Creator: @d2l_ai & https://t.co/QQt98VNLUp, Relapsing 🎷
Sepp Hochreiter @HochreiterSepp
10K Followers 395 Following Pioneer of Deep Learning and known for vanishing gradient and the LSTM. I mostly tweet about random ArXiv papers which sparked my interest.
Thomas House 热爱�.. @TAH_Sci
6K Followers 974 Following Professor of Mathematical Sciences. Views own & open for revision. Mainly COVID plus other modelling & data science in health.
Marius Pachitariu @ma.. @marius10p
7K Followers 1K Following running a lab @HHMIJanelia, data (neuro) scientist, visual cortex, large-scale recordings #Kilosort, #Suite2p, #Cellpose
Nature Medicine @NatureMedicine
336K Followers 246 Following Nature Medicine is a research journal devoted to publishing the latest advances in translational and clinical research for scientists and physicians.
nature @Nature
2.6M Followers 4K Following Research, News, and Commentary from Nature, the international journal of science. For daily science news, get Nature Briefing: https://t.co/wGmQlQ8a4D
medRxiv @medrxivpreprint
18K Followers 0 Following The non-profit preprint server for the health sciences
Big Data Institute @bdi_oxford
7K Followers 169 Following The Big Data Institute | University of Oxford | Tweets about health, our research and impact.
Sarah Berry @saraheeberry
7K Followers 416 Following Nutritional Sciences, King's College London. Leading RCTs in Diet & Cardiometabolic health and Precision Nutrition.
Conor Feehily @sligomicrobe
973 Followers 824 Following Host-Microbiome Interaction | Vaginal Microbiome | Preterm Birth | Functional Genomics
Genomics plc @Genomicsplc
3K Followers 915 Following Transforming health, healthcare and drug discovery through the power of genomics
Peter Donnelly @genemodeller
3K Followers 133 Following Founder and CEO of @Genomicsplc and Emeritus Professor of Statistical Science @UniofOxford.
Ben Ogorek @BenOgorek
661 Followers 526 Following Statistician. Creator of Chrome extensions "XCoach" for timed @X sessions and daily stats, and "TextLinks" for mnemonic URL bar quick links. Free in the store.
join_zoe @Join_ZOE
30K Followers 1K Following Eat for your best health with personalised advice from the world’s largest nutrition science study
Jonathan Wolf @jwolf
1K Followers 44 Following CEO and cofounder @join_ZOE - a health technology company. We built the COVID Symptom Tracker with our partners at King's College London
Tim Spector MD (Prof) @timspector
117K Followers 801 Following PI of the ZOE PREDICT studies & the ZOE Health Study @Join_ZOE Researcher/Author on microbiome, nutrition & genomics. All views my own.
NHS-R Community @NHSrCommunity
4K Followers 307 Following Hosted by @Strategy_Unit & supported by @HealthFdn. This account will no longer be regularly posted from: https://t.co/32XSmgnjzL
Zoë Turner @Letxuga0.. @Letxuga007
798 Followers 990 Following Senior Data Scientist in @midlandsdsn. She/her Senior Fellow of @nhsrcommunity GitHub: lextuga007
STEPN | Public Beta P.. @Stepnofficial
565K Followers 371 Following STEPN is a web3 lifestyle app with social & game elements. For support ➡️ https://t.co/PFqLTd6kWO
Prof Gavin Yamey @gav.. @GYamey
41K Followers 8K Following Professor of Global Health & Public Policy @DukeU. Director, Center for Policy Impact in Global Health. DJ @wxdu. TIME columnist. He/him. Tallest Jew on Earth.
Alexandru Cernat @cernat_a
1K Followers 0 Following Associate professor in social statistics @OfficialUoM | @SocialStatsMan | @SocialStats_RSS | survey methods | latent variables | longitudinal data
Elon Musk @elonmusk
181.4M Followers 584 Following
Professor Chris Whitt.. @CMO_England
368K Followers 283 Following England's Chief Medical Officer. Annual reports and talks on health https://t.co/uIE9U4HVtO
Muge Cevik @mugecevik
159K Followers 2K Following Clinician Scientist • Infectious Diseases / Virology @univofstandrews • currently @IDIMakerere • globalhealth, TB, HIV • #vegan🌱• RT ≠ endorsement
Russell Hope @SuperbugKiller
734 Followers 341 Following Microbiologist with focus on antibiotic resistant bacteria. Currently running national HCAI surveillance. Views presented on this account are my personal ones.
Susan Hopkins @SMHopkins
21K Followers 3K Following Infectious diseases clinician & epidemiologist, Chief Medical Advisor @UKHSA, (also work @RoyalFreeNHS @UCLInfectImm). Hon CBE. Research: https://t.co/dBBfE4KWna
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6K Followers 6K Following Contemporary artist exploring microbiology, genomics, synthetic biology, ethics, robotics, AI, medical history and emerging technologies #BioArt
Global Pathogen Analy.. @_gpas_
171 Followers 149 Following Enabling global genomic sequencing analysis, first for SARS-CoV-2 and then other pathogens
Dr Justine Rudkin @ScouseMicrobe
2K Followers 896 Following Lecturer of Bacteriology, Uni of Glasgow. Bacterial Virulence, Host-Pathogen-Microbiome Interaction. Editor, Access Microbiology. @scousemicrobe.bsky.social
Engineering Science, .. @oxengsci
6K Followers 774 Following The only official twitter page for The Department of Engineering Science at the University of Oxford.
Kumeren Govender @kumiGov
397 Followers 737 Following Chief Scientific Officer at GPAS | Co-Founder at Mable (Acquired) | MD | DPhil (Oxon) | Researcher at Oxford | Rhodes Scholar
Bernadette Young @BugsBernadette
936 Followers 755 Following Transplanted Melbournian, now adapted to Oxford clay. Infection doctor and academic
James Kavanagh @JamesKavanagh
289 Followers 902 Following (he/they) PhD student in infectious diseases with an interest in evolutionary medicine and diagnostics 🏳️⚧️🏳️🌈 #BiInSci new account - @j_kavanagh20
Alice Brankin @AliceBrankin
78 Followers 84 Following PhD student at University of Oxford working on antibiotic resistance 💊🧬🦠
Emma Pritchard @emmapritchy
76 Followers 113 Following Second year DPhil/ medical statistician at @UniofOxford. Also working with @ONS on the COVID-19 Infection Survey. All opinions my own.
Bede Constantinides @beconsta
1K Followers 4K Following Pathogen genomics & data standards | bioinformatics @nanopore l visitor @ndmoxford | @[email protected]
Sam Lipworth @SamLipworth
551 Followers 1K Following Clinical Research Fellow in infection @UniofOxford. Also choral singer and orchardist.
Philippa Matthews @pippa_matt
2K Followers 3K Following #Infection doctor 🦠🧬 #HBV research @TheCrick @UCLHResearch Global health 🌍, Equity in #STEMM. Double mum 💕 #European #BlackLivesMatter My own views
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I wrote a new post about The Hallucination Problem. In this post I really lay out what I think "hallucinations" really are, a bit about why they happen, and whether we can expect them to get better. Here's a thread with some of the main points. medium.com/@colin.fraser/…
If you want to follow our new Data Insights more systematically, they now have their own RSS feed: ourworldindata.org/atom-data-insi…
Earlier this month, we launched Data Insights, a new bite-sized format in which we focus on one of our 4,000+ charts to highlight one important detail about how the world is changing: ourworldindata.org/data-insights Here’s a selection of the insights we’ve published so far… 🧵
Foundation models are well-established in vision and language, but time series forecasting has lagged behind - it still relies on dataset-specific models. Meet Lag-Llama: the first open-source foundation model for time series forecasting!
With @MartynFyles @fearon_liz @KarinaVihta @fergusac @rajenki @CarolineEJay @GrahamMedley and others.
Now peer-reviewed! "Diversity of symptom phenotypes in SARS-CoV-2 community infections observed in multiple large datasets" - we consider multiple large datasets to consider the diverse ways COVID symptoms co-occur. nature.com/articles/s4159…
Thanks @KarinaVihta @NicStoesser @pippa_matt @drdavideyre @kb_pouwels @stat_sarah & all co-authors!
@ModMedMicro @OxfordBRC @KarinaVihta @emmapritchy @drdavideyre @pippa_matt @NicStoesser @stat_sarah @NDMOxford Have SARS-CoV-2 symptoms changed in the UK population over time? news-medical.net/news/20210829/… @medrxivpreprint @UniofOxford @OfficialUoM @IBMResearch @ONS #Coronavirus #COVID #SARSCoV2 #UK #Symptoms
It's World Antimicrobial Awareness Week! #WAAW #WAAW2022 #WorldAntimicrobialAwarenessWeek #AMR #AntibioticResistance #antimicrobialResistance @HPRU_amr @NDMOxford
Great webinar from @_ColinFay - his last tip
Our first online talk by Dev - on PPT report automation - saved their loads of time - using NHSRPlottheDots package and officer package
Next up Mark - using leaflet package for mapping reports
#NHSR2022Conf Muhammad Faisal - next up
#NHSR2022Conf simple logistic compared well with "more fancy" methods
#NHSR2022Conf Next up is Zoe Turner : )
Next-up - Karina-Doris on Iterative sequential regression for real time surveillance of infectious diseases
A taster from the 2nd of the 8 lecture 'Introduction to University Mathematics' course that our students take at the outset of their @OxUniMaths life, as we prepare them for the step up from high school. You can watch lecture 2 here. We are showing all 8. youtube.com/watch?v=UCev1n…
New preprint with @SamLipworth, @NicStoesser, and others! biorxiv.org/content/10.110… (1/6)
Published today in @TheLancet after peer review – our randomised controlled trial of a policy of daily lateral flow device testing vs quarantine for Covid-19 contacts in secondary schools and colleges. (1/8) authors.elsevier.com/a/1dlF4V-4XDSd…
How long do antibodies last after vaccination? SARS-CoV-2 anti-spike IgG antibody responses after 2nd dose of ChAdOx1 or BNT162b2 in the UK general population medrxiv.org/content/10.110… - Jia Wei, @kb_pouwels @NicStoesser @pippa_matt @stat_sarah + others @ONS Covid infection survey
Trends for United States
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