AnniZ Lab @AnniZLab
Founder, CEO @ Genomiverse | BioinfoPhD | Asst Prof @ NTU | Biology-informed AIs for microbes | Ligand-protein binding | knowledge graph GNN genomiverse.net Singapore Joined March 2017-
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AnniZ Lab retweeted
Awesome!
Today we're announcing ESMFold2, an open scientific engine to power prediction, design, and discovery across protein biology. The new model delivers state of the art performance on protein interactions, especially antibodies, a critical modality for therapeutics. We have
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Check out our updated website - we would love new ideas! We used an LLM to restyle it and then spent a bunch of manual effort going through the results. We are now building checks to keep things organized - please talk to us if you are interested :) 🦠🖥️✨ genomiverse.net
New feature: querying multiple terms in our microbiome knowledge graph (143k papers)! Generated by LLM prompt engineering with > 96% accuracy (expect-check). Demo with 1% data: genomiverse.net/MicrobiomeConn… Feedback is super appreciated :) #microsky #microbiomesky 🦠🧪🧬🖥️✨
Lots of fun to present our latest work on 11th Microbiome R&D and Business Collaboration Congress: Asia! global-engage.com/product/microb…
Anni's new startup! genomiverse.net 1) Biology-informed AI for bacterial DNA-protein binding prediction (demo - new bindings in E. coli; 40 species in July; 6k+ species this year); 2) Microbiome knowledge graph based on 143k papers: (demo - 1% data; 100% data in July)!
AnniZLab is now on Bluesky YAY bsky.app/profile/annizl… We’ll share new job posts, exciting project updates, and fun lab activities there. Please follow us if you are interested :)
AnniZ Lab at Nanyang Technological University is recruiting one PhD student with an interest in AI 👩💻& Microbiology 🦠(details at genomiverse.net). If you are interested, please reach out with your CV to [email protected]. Thank you!
NTU College of Science shares our new DNA alignment tool published in Genome Biology! genomebiology.biomedcentral.com/articles/10.11…
A team of scientists from @SCELSE_SG and @ntusbs, led by Asst Prof Anni Zhang (@AnniZLab), has developed a new DNA sequence alignment algorithm, called X-Mapper, that is significantly faster and more accurate than existing methods. tinyurl.com/22evjd8n
AnniZ Lab retweeted
A team of scientists from @SCELSE_SG and @ntusbs, led by Asst Prof Anni Zhang (@AnniZLab), has developed a new DNA sequence alignment algorithm, called X-Mapper, that is significantly faster and more accurate than existing methods. tinyurl.com/22evjd8n
We definitely don't want to confuse our audience💪! genomebiology.biomedcentral.com/articles/10.11…
For anyone using BMC proofing system, be careful not to let it delete a word🤣! genomebiology.biomedcentral.com/articles/10.11… #notfoolproof #publishingIShard
For anyone using BMC proofing system, be careful not to let it delete a word🤣! genomebiology.biomedcentral.com/articles/10.11… #notfoolproof #publishingIShard
AnniZ Lab retweeted
Our new short read sequence aligner was just published! genomebiology.biomedcentral.com/articles/10.11… We spent a bunch of effort making it accurate and easy to use. Check it out! @AnniZLab
Our new tool "X-Mapper: fast and accurate sequence alignment via gapped x-mers" now published on Genome Biology! Please try it if you work on DNA sequences :) github.com/mathjeff/Mapper genomebiology.biomedcentral.com/articles/10.11…
@mathjeff1 Please try it if you work on DNA sequences :) github.com/mathjeff/Mapper
@razoralign Please try it if you work on DNA sequences :) github.com/mathjeff/Mapper
AnniZ Lab retweeted
X-Mapper: fast and accurate sequence alignment via gapped x-mers genomebiology.biomedcentral.com/articles/10.11…
@CellGenomics This study was also reported by MIT News! news.mit.edu/2024/human-gut…
AnniZ Lab retweeted
CRISPR-Cas spacer acquisition is a rare event in human gut microbiome dlvr.it/TGygdc
MIT News: news.mit.edu/2024/human-gut… — Sharing our new publication in Cell Genomics: cell.com/cell-genomics/… about why our human gut microbiome rarely updates its CRISPR defense systems! @CellGenomics @MIT @CellPressNews
AnniZ Lab retweeted
Meet Asst Prof Anni Zhang: MIT-trained Computational Biologist & SCELSE Collaborator! Learn about her research passions, future vision, and hand drum skills. Watch video till the end for a surprise: linkedin.com/feed/update/ur…
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