Open Molecular Software Foundation @openmsf
Building open source software and communities in molecular sciences omsf.io Joined May 2021-
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🧵1/6 We're so excited to announce the inaugural machine learning for drug discovery summer school! 🏫 What: Lectures from Yoshua Bengio, @DrAnneCarpenter, @tiwarylab, @rbhar90, and more. 📍Where: @Mila_Quebec 📅 When: June 12th - 21st Learn more here: portal.ml4dd.com
Join us at OMSF Symposium 2024 - register at the link below! omsf.notion.site/OMSF-Symposium…
Announcing 2024 Open Force Field Mini-Workshops! On February 20th, join the team as they walk through SMIRNOFF Force Fields - find out more here: news.omsf.io/announcing-202…
We are proud to announce BPDMC as our next sponsored project at OMSF. bpdmc.org
We are hiring! OMSF is seeking RSEs to work on our POSE grant initiatives. This team will be instrumental in building a resilient OSE. If you are interested, let us know. If you know someone who might be interested, we'd love to hear from them too! news.omsf.io/job-openings-a…
Please welcome Julia and Open Rosetta to OMSF. news.omsf.io/open-rosetta-a…
Last call for applicants who have a passion for community building, open source research software and/or molecular modeling tools! Please share!
Last call for applicants who have a passion for community building, open source research software and/or molecular modeling tools! Please share!
Just a reminder that @openmsf is looking for a community manager! Please consider to apply if your interests span research and open source software in molecular sciences, and you enjoy connecting to other people. If that's not your cup of tea, please help us spread the word!
Just a reminder that @openmsf is looking for a community manager! Please consider to apply if your interests span research and open source software in molecular sciences, and you enjoy connecting to other people. If that's not your cup of tea, please help us spread the word!
We are looking for a community manager to help us build efficient information flows for #opensource projects in molecular sciences, and herd cats in real and virtual spaces!🐱 Read the job description: omsf.io/about/careers/… Apply here: forms.gle/wMUu6eU82vzpnJ… Please RT!
We are looking for a community manager to help us build efficient information flows for #opensource projects in molecular sciences, and herd cats in real and virtual spaces!🐱 Read the job description: omsf.io/about/careers/… Apply here: forms.gle/wMUu6eU82vzpnJ… Please RT!
Very excited to announce @BayerPharma @Dassault3DS @CHARMTherapeutx @Basecamp_Res all joining @open_fold hosted by @openmsf today! More #biotech #ai announcements coming soon. Happy thanksgiving! #drugdiscovery businesswire.com/news/home/2022…
Sergey Ovchinnikov �.. @sokrypton
12K Followers 3K Following Scientist, Assistant Professor @MITBiology, #FirstGen, ProteinBERTologist
David Mobley @davidlmobley
4K Followers 236 Following Professor, PharmSci & Chem @UCIrvine. Grad program director. Editor @LiveCoMS. Christian, dad of 6. @[email protected]
Olexandr Isayev 🇺�.. @olexandr
8K Followers 3K Following #CompChem Prof @CMU_Chem. Connecting chemical sciences with AI & #MachineLearning. #tarheels fan. Care:#design, #photography #Ukraine #cats🐈 Rants are mine
Patrick Walters @wpwalters
5K Followers 381 Following cheminformatics, machine learning, drug discovery, opinions
John Chodera (he/him) @jchodera
9K Followers 8K Following Changing drug discovery one ratio of partition functions at a time. Heading up antiviral discovery for pandemics: https://t.co/uN4XpX1mjt https://t.co/YAg9PBYuBl
Simon Batzner @simonbatzner
4K Followers 691 Following RS at Google DeepMind. Prev: Harvard, MIT, NASA, Google Brain.
Martin Vögele @Blendenfleck
5K Followers 3K Following Computational biophysicist at Schrödinger, prev. @Stanford & @MPIBP | amateur photographer | history+language nerd | ö=oe | 🇩🇪 🇪🇺 🏳️🌈 | all views my own
Joe Greener @jgreener64
1K Followers 776 Following Computational chemist/structural bioinformatician working on improving molecular simulation at MRC Laboratory of Molecular Biology.
Miranda Quintana Grou.. @GroupQuintana
3K Followers 3K Following Miranda-Quintana group @UF Theoretical and Computational chemistry.
Gustaf Ahdritz @gahdritz
597 Followers 128 Following ML Foundations Group @hseas. Previously @MoAlQuraishi's lab @Columbia.
Greg Landrum @dr_greg_landrum
4K Followers 377 Following No longer active here, check: @[email protected] @greglandrum.bsky.social
Machine Learning: Sci.. @MLSTjournal
9K Followers 10K Following A multidisciplinary, #openaccess journal devoted to the application and development of #machinelearning for the sciences. Published by @IOPPublishing.
Andrew S. Rosen @Andrew_S_Rosen
7K Followers 4K Following Assistant Professor at @Princeton (Sum. 2024). Quantum-chemical engineer. Good vibes only. Lab: @RosenGroupPU
Cole Group @ColeGroupNCL
3K Followers 2K Following We are a computational research group @UniofNewcastle led by #UKRIFLF Dr Danny Cole specialising in atomistic simulations in medicinal chemistry and biology.
Filiz Kuybu @filizkuybu
49 Followers 424 Following @IMPRS_ML PhD Candidate in the Hopfner Lab at @GeneCenter_LMU exploring #DNArepair #cryoEM
Miguel_Pedraza @CabezaDespejada
57 Followers 2K Following
Farid Babayev @DNARNAATP
3K Followers 5K Following #Bioengineering V.Akhundov National Scientific Research Medical Prophylactic Institute Azerbaijan.
Punit Kumar Jha @punit_chem
63 Followers 372 Following Research Scientist @SandboxAQ, ex @GoodChemistryCo , Former Chem Graduate Student @ChemistryUIUC. Research on theoretical and computational chemistry.
Serhan Turunç @Serhan_Turunc
34 Followers 604 Following
Edison Florez @edisonflorez_
153 Followers 1K Following Getting insight from data. Chemistry by training and physics at heart speaking computer language. Python/C++/Fortran.
Daniel Alvarez @daninthenet
328 Followers 1K Following 👨🏻💻Principal Scientist Drug Discovery | Compchem | method development #mdmix | scientific software developer | 👨🏼🎨🎨Oil painting
Ozlem Dmr @Ozlem__Dmr
309 Followers 2K Following #CompChem #DrugDiscovery Opinions & views are solely my own.
Akash Bahai @akashbahai
524 Followers 3K Following Structural Bioinformatics | Machine Learning, PostDoc at NTU | Past: @IISERPune, @Helmholtz_HZI
Sameer Saurav @Sameerchm
36 Followers 179 Following Computational Chemistry PhD candidate @IITKanpur, BS-MS @iiserkol
Daniel Fernandes @daferna2
615 Followers 4K Following Software Eng in Electronic Design Automation: Building SW to make faster HW. Web3 alt @dfern_eth B4: @Stanford EE, @ECEIllinois https://t.co/2r7Su0zcEJ
Kingshuk Das @Kingshuk_chem
13 Followers 107 Following Computational Biophysics & Chemistry PhD Student at IACS Kolkata.... Molecular Dynamics, Biomolecular Simulations, Protein dynamics .... BSc MSc from JU
Harutyun Sahakyan @SahakyanHK
285 Followers 142 Following Evolutionary Genomics Research Group @NLM_NIH/@NCBI Prev: Computational Modeling of Biological Processes at IMB NAS RA
[email protected] @vogti
416 Followers 866 Following Doing #golang and #kubernetes for a living. #rust, #zig and #wasm enthusiast. @[email protected]
Darian @darianyang
128 Followers 396 Following Biophysics Ph.D Candidate @PittTweet and @CarnegieMellon in the Chong and Gronenborn Labs
KT @kpmans_theorem
180 Followers 866 Following Chemistry PhD candidate in the Voelz Lab. Mastodon: https://t.co/WmmXBohw2T
Nad @Nad_5_2
3 Followers 65 Following
Michael Brocidiacono @brocidiacono
57 Followers 107 Following PhD Student at UNC Eshelman School of Pharmacy. I teach chemistry to computers.
Jaydeep Rade @JaydeepRadeJD
50 Followers 663 Following Deep Learning | Computer Vision | Protein Folding | PhD Candidate at Iowa State University
Yifang Chen @yifang_chen18
20 Followers 155 Following 22fall MRes in Drug Discovery & Development at ICL (Rouse & Barnard group) | BSc in Applied Chemistry at UoR (Hartle group)
David Bellamy @DavidRBellamy
278 Followers 2K Following Builder in biotech. AI for scientific discovery. PhD from @Harvard. 🇨🇦
Jun Xia@ICML 2023 @JunXia_Westlake
262 Followers 1K Following Third-year CS Ph.D. Candidate at @Westlake_Uni and @ZJU_China.
jorge gonzalez @JorgeFGonzalezH
20 Followers 65 Following
Wei-Tse Hsu @WeiTseHsu
298 Followers 552 Following Ph.D. from @shirtsgroupCU. Keen on computational biophysics, enhanced sampling & education. (See MD tutorials on my site!) Rookie runner. Made in Taiwan.
Greg Dignon @Dignon_Lab
125 Followers 563 Following Official account of Dignon lab at Rutgers Chemical and Biochemical Engineering.
Benjamin Tudor Price @TudorPrice
66 Followers 162 Following Computational Biologist interested in protein design, ML, and synthetic biology | prev @broadinstitute | undergrad @uoft | fan of plants, music, tech, & sci-fi
Nick Polizzi @nickpolizzi_
1K Followers 548 Following Assistant Professor @DanaFarber @DFCI_ChemBio and @harvardmed @HMS_BCMP. I like proteins. And other things too. he/him/his
Nate Stanley @natehstanley
469 Followers 954 Following Computational biologist interested in using biology, chemistry and engineering to solve medical and industrial problems.
Craig Morton @_DrCJM_
494 Followers 1K Following Scientist, father, gamer, avid reader, whisky aficionado and recreational scuba diver. All things #proteinstructure and #drugdesign 🇦🇺 #cancersucks
Akos Nyerges @AkosNyerges
2K Followers 925 Following #SyntheticBiology, #GenomeEngineering & #DirectedEvolution | Research Associate at @harvardmed, George M Church @geochurch's lab | @NIH @NIBIBgov K99/R00 Fellow
Mac Kevin Braza @MacKevinBraza
495 Followers 2K Following Ph.D. student in Biochemistry and Molecular Biophysics at @RommieAmaro Lab @UCSanDiego
Fred Pontes @serestranho
435 Followers 985 Following postdoc @UoL_LICAMM @UniversityLeeds | Ich habe nichts zu sagen! computational chemistry
Acellera @acellera
1K Followers 153 Following Computable Drug Discovery | Developing the algorithms to automate drug discovery | PlayMolecule | ACEMD platform.
Brendan Hayward (KFC .. @BMJHayward
506 Followers 5K Following Acquitted hacker, recovering insomniac My stuff: https://t.co/jso2reDbGG
damien chalaud @dchalaud
956 Followers 2K Following Sr Director of Communications @TheNeuro_MNI McGill Lets Change Science #OpenScience Pdt British Quebec Business Coalition Views expressed are my own
Niklas Rindtorff @Niklas_TR
3K Followers 3K Following open tools and data accelerate progress 🥼 co-founder @lab_dao & openlab association, physician, ex @dkfz | @BroadInstitute | @HarvardDBMI | @mattertolife
Bob Smith @BobSmith913172
29 Followers 396 Following
Osman Mamun @Osman_G_Mamun
118 Followers 260 Following ML Scientist @NEQBio | AI Force Field Developer | Drug Discovery | Molecular Dynamics
Phil Ross @biophilross
407 Followers 847 Following @HHMINEWS Postdoctoral associate @DrJuanLMendoza @UChicagoPME working on structure/function of cytokines and their receptors
Joe Bluck @Joe_P_B
270 Followers 363 Following Computational molecular design @Bayer | Previously a DPhil student @UniofOxford | The rare tweets here are my own views | He/him
David Mobley @davidlmobley
4K Followers 236 Following Professor, PharmSci & Chem @UCIrvine. Grad program director. Editor @LiveCoMS. Christian, dad of 6. @[email protected]
John Chodera (he/him) @jchodera
9K Followers 8K Following Changing drug discovery one ratio of partition functions at a time. Heading up antiviral discovery for pandemics: https://t.co/uN4XpX1mjt https://t.co/YAg9PBYuBl
Cole Group @ColeGroupNCL
3K Followers 2K Following We are a computational research group @UniofNewcastle led by #UKRIFLF Dr Danny Cole specialising in atomistic simulations in medicinal chemistry and biology.
OSPO++ @ospoplusplus
139 Followers 32 Following A network and a community of collaborative open source program offices in universities, governments, and civic institutions.
Clara Christ @ClaraDChrist
637 Followers 68 Following Passionate about advancing drug discovery projects with digital means; Computational Molecular Design @Bayer Reflecting my own views
Michael K Gilson @MichaelKGilson
2K Followers 1K Following Professor, UC San Diego. Opinions expressed here are only my own. My tweets are not medical advice. Mastodon account: @[email protected]
Living Journal of Com.. @livecomsj
3K Followers 7 Following The Living Journal of Computational Molecular Science (LiveCoMS) provides a peer-reviewed home for living articles in this subject area.
Join us at OMSF Symposium 2024 - register at the link below! omsf.notion.site/OMSF-Symposium…
Will be speaking about Open Force Field progress etc tomorrow (Sunday) in the Ron Levy symposium and will be at #ACSSpring2023 thru Wed. Looking forward to catching up & talking science! 10:50 am - 11:15 am Sagamore Ballroom 5, Convention Center
Interested in enhanced sampling methods? Have questions? We've got you covered with a new review presenting unifying principles and highlighting differences between these methods. doi.org/10.33011/livec… From @Michael_Shirts , @DelemotteLab and others! #compchem
What are the hardest problems right now in drug discovery? Has deep learning had any effect?
Slow motion videos of objects falling in water, with highly unexpected but extremely satisfying geometries and shapes. Source @FrRonconi
Very excited to announce @BayerPharma @Dassault3DS @CHARMTherapeutx @Basecamp_Res all joining @open_fold hosted by @openmsf today! More #biotech #ai announcements coming soon. Happy thanksgiving! #drugdiscovery businesswire.com/news/home/2022…
We’re excited to announce support for #OpenSource projects as part of our Essential Open Source Software program + @napari_imaging hub that will help ensure scientists have the tools needed to measure human biology in action 🧵 czi.co/3fFaQMZ
The @openforcefield benchmarking manuscript, led by a big group of our pharma partners, is now up as preprint! chemrxiv.org/engage/chemrxi… #compchem
Also: @richardjgowers is giving a talk on the @openfreeenergy software stack Thursday AM @lilyminium is presenting our work towards creating an ecosystem of packages for @mdanalysis Wednesday PM S404a @openmsf @NumFOCUS #opensource #OpenScience
@mdanalysis @openmsf business meeting 🤓
Spent a very useful day at @cressetgroup with @joshhorton93 talking about #QUBEKit, @openforcefield BespokeFit, and all things force field related! Great to see uptake of @openforcefield and related methods in industry.
From academic inception of AI in protein folding to industrial AlphaFold to OpenFold, from academic inception of force field to industrial force fields to Open Force Field, etc.. An interesting pattern of academic inception to industrial execution to academic democratization.
Hop on board of the #OpenFold consortium @openmsf to contribute to development of #opensource #ML modeling tools 🤖
Building on last week’s announcement of OpenFold, an academic-industry consortium is being announced today within the non-profit @openmsf. The OpenFold Consortium openfold.io will develop open source ML-based molecular modeling tools in a community-driven fashion. 1/3
Hey @CHARMTherapeutx, welcome aboard! Let's do this thing. Everyone else, check out openfold.io/#joining and join the OpenFold team
Community-driven: academic groups and companies collectively define high priority scientific areas to pursue within umbrella of machine-learning based molecular modeling.
OpenFold exists to propel the life sciences – with a particular emphasis on protein structure, function and design – into the AI era and deliver freely-available, transformative tools and data sets to the world. Here's how we do that
This just the beginning! Set the priorities, build the tools, change the world – join the team openfold.io/#joining
And here’s OpenFold itself! Follow it and @openmsf for more in this space. :)
Please allow us to introduce ourselves - we are OpenFold openfold.io, a consortium of life science & tech cos & academics democratizing AI for Biology. Founded by @MoAlQuraishi @ArzedaCo @cyrusbiotech @OutpaceBio @PrescientDesign help from @AWS businesswire.com/news/home/2022…
...and science lead @lilyminium explains how our QM-derived bond and angle parameters can help initialise FF parameter fits for improved accuracy. doi.org/10.1021/acs.jc…
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