Open Plant Pathology @OpenPlantPath
Supporting and promoting openness and reproducibility in plant pathology as well as human equality we're most active at https://t.co/TtXM0wzMCt. openplantpathology.org Global Joined January 2018-
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Open Plant Pathology retweeted
New addition to the R4PDE book. A shiny app that allows to visualize the shapes of four population dynamics models by varying initial inoculum and infection rate. edelponte.shinyapps.io/epidemics/ @OpenPlantPath
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Open Plant Pathology retweeted
Very cool new tool for plant disease severity training from @edelponte at edelponte.shinyapps.io/traineR/ Choose leaf and lesion parameters and start training! @OpenPlantPath @ufvplantpath @TropPlantPathol @plantdisease #IPM #agtwitter @planthealthprog
The time has come, we’re now also on Mastodon, scicomm.xyz/@openplantpath… please join us!
Rice disease modelling in Julia!
We have a new blog post by @edelponte. Fit nonlinear models in #rstats to infection as a function of temperature and wetness duration openplantpathology.org/posts/2022-10-…
Share your data (#FAIRdata) and your code!
If you're interested in #PSHB responses from a biosecurity perspective, @IrelandKylie has shared her recent @CCH_USQ seminar with us. It's available now on our YouTube channel. openplantpathology.org/posts/2022-10-…
Beetle (Polyphagous Shot Hole Borer) + #fungus Fusarium euwallaceae = #Fusarium #Dieback in multiple tree species. @Shannon_C_Lynch discussed their work on endophytic #microbiome in this beetle-pathogen system using culture-based and metabarcoding approaches. #PSHB @NPDN
👀 New resource for #RStats users! A CRAN Task View for agriculture. Yes, it includes (a small) plant pathology section. Get busy and contribute, plant pathology community!
New CRAN Task View: Agricultural Science #agriculture #rstats By Julia Piaskowski @seedsandbreeds, Adam Sparks @adamhsparks, Janet Williams URL: CRAN.R-project.org/view=Agricultu…
The time invested in learning version control, e.g. Git, SVN, etc. is well worth it for many scientists that conduct computational research. It makes it easier to track your code changes and share your code too!
New CRAN Task View: Agricultural Science #agriculture #rstats By Julia Piaskowski @seedsandbreeds, Adam Sparks @adamhsparks, Janet Williams URL: CRAN.R-project.org/view=Agricultu…
He will be missed!
Please post your messages, images, or videos to celebrate Dr. Madden's retirement kudoboard.com/boards/NazQ2iLh
Fantastic to see our interview with @KamounLab being discussed again!
Here be dragons! New technologies like AI and Machine Learning are fantastic tools, but we should proceed with caution and know how to properly use them. #ReproducibleResearch
Could machine learning fuel a reproducibility crisis in science? nature.com/articles/d4158…
Hear, hear!
I just published: Open science to tackle plant health emergencies: enough excuses please. link.medium.com/A5BpxpgOLrb
Open Plant Pathology retweeted
This is a great idea, one place to find all the seminars from the Qld branch of APPS. Well done @QldApps @OpenPlantPath 👏🥳
We're happy to support the @QldApps of @Plant_Pathogens. Recordings of previous seminars are on our @YouTube channel, youtube.com/playlist?list=… More information is available from our website as well, openplantpathology.org/#category:Qld-… #OpenScience
We're happy to support the @QldApps of @Plant_Pathogens. Recordings of previous seminars are on our @YouTube channel, youtube.com/playlist?list=… More information is available from our website as well, openplantpathology.org/#category:Qld-… #OpenScience
Open Plant Pathology retweeted
Western Sydney Uni has a competitive PhD scholarship round open for a January start. If you are interested in applying for a project concerning (1) molecular signaling in chickpea disease resistance, or (2) plant signaling proteins involved in ectomycorrhizal symbiosis, DM me!
👀 "The datasets and custom R scripts generated and/or analyzed in this study are available in the @figshare repository, doi.org/10.6084/m9.fig…" 🤩🙌 #ReproducibleResearch #OpenScience
Excited to share our work developing & comparing ImageJ vs machine learning image analysis methods to measure cassava bacterial blight symptoms. We hope these methods can be used by others studying CBB or be modified to study other plant diseases! plantmethods.biomedcentral.com/articles/10.11…
For all of you plant-microbe-soil interaction fans, we've a new USQ CCH seminar by @ch_birnbaum on our Youtube Chanel! openplantpathology.org/posts/2022-06-… #OpenScience
Open Plant Pathology retweeted
@OpenPlantPath Help with stats. I need to analyze a time series experiment. qPCR data of viruses from potato tubers over time (6mo). I want to find the best detection window among other things. Any good references for time series in R?
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