Arthur Viode @ArthurViode
Joined March 2023-
Tweets13
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Following91
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Dear MS Community For those who did not have the chance to see my ASMS poster about our new search-engine, let me run you through some of the highlights. Roughly a year ago we started looking into improving our capabilities for unspecific searches.
Predictive gene expression signature diagnoses neonatal sepsis before clinical presentation - eBioMedicine thelancet.com/journals/ebiom…
New large-scale plasma proteome profiling study, 1100+ samples, 6Tb of data, 2500+ proteins quantified. Analysis using Bruker DDA-PASEF. I actually think DDA MS1 LFQ is a solid strategy and even has some advantages, even in what seems to be the era of DIA. science.org/doi/10.1126/sc…
Want reliable quantities? Brilliant students in my lab @ZiskaKistner @JustusGrossmann figured out how. We present QuantUMS, an ML-based algorithm for step-change better quantitation in proteomics and statistical confidence in individual quantities biorxiv.org/content/10.110… QuantUMS is integrated in DIA-NN (beta version referenced in preprint), but we also plan to release it as an open-source tool, for use on various kinds of data, not just DIA. We further anticipate significant gains to be achieved by integrating the accuracy metric reported by QuantUMS with existing packages for statistical analysis of proteomics data. Some benchmarks are in the twitter thread below.
Check out our perspective on MS-based body fluid #proteomics in @molcellprot. We discuss how recent and cutting-edge advances overcome long-standing challenges and bring the field to an exciting turning point. Great thanks to Jakob Bader and @labs_mann mcponline.org/article/S1535-…
Meta-analysis of published cerebrospinal fluid proteomics data identifies and validates metabolic enzyme panel as Alzheimer’s disease biomarkers cell.com/cell-reports-m…
'Using mass spectrometry to validate mouse models of #tauopathy' Yan Yan & Casey N. Cook @MayoClinicNeuro #AlzheimersDisease #FrontotemporalDementia bit.ly/3ZHqqbx
Our new study in @NatureComms evaluates tools to detect longitudinal differential expression in #proteomics data and introduces a robust approach RolDE for longitudinal #biomarkerdiscovery. @BioscienceTurku @UniTurku @SuomenAkatemia @InFLAMES_Health rdcu.be/c15A8
Just introduced a game-changing plasma depletion method for deep and high throughput protein profiling! @bruker @EvosepBio @ScienceAdvances #proteomics #massspectrometry #innovation #clinicalresearch #COVID19 #HarvardMed science.org/doi/10.1126/sc…
The Hanno Steen lab at Boston Children's' Hospital optimized #FragPipe for a high-performance computing environment, and applied it to analyze 3348 timsTOF plasma samples (6.4 Tb) from a longitudinal COVID-19 patients study. pubs.acs.org/doi/full/10.10…
The @steen_lab presents a Fragpipe-based parallelization strategy for analysis of LC-MS proteomics data. Their strategy reduced run time by 90% & enables them to map the proteomes of 1000s of samples! pubs.acs.org/doi/10.1021/ac…
'Common mouse models of #tauopathy reflect early but not late human disease' @steen_lab @ionicwoman @harvardmed #AlzheimersDisease #proteomics bit.ly/3Y21GuI
Kathrin Wenger and our team asked, Why do drugs for Alzheimer’s Disease work in animal models, but often fail in clinical trials? …arneurodegeneration.biomedcentral.com/articles/10.11… #AlzheimersDisease #tauopathy #proteomics #HarvardMed #neurodegeneration #dementia
An-phi Nguyen @phineas_zu
204 Followers 388 Following Lead AI Engineer @biognosys. I like stuff, including ML, DL, Stat, CompBio, and instant noodles.
Romain @Romain1991
63 Followers 320 Following Responsable Administration des Ventes / Fan de l’OL, du foot et du sport en général 😅 / Runner
Mukesh Kumar, PhD @mukeshbiot
72 Followers 119 Following Principal Scientist @ CST. Proteomics, Mass Spec, Neurodegeneration, mAb, Harvard Medical School, Max Planck Institute of Molecular Cell Biology and Genetics.
Vadim Demichev @DemichevLab
4K Followers 2K Following Group Leader at @ChariteBerlin. Founder of Aptila Biotech. Proteomics technologies and applications, DIA-NN author.
Vincent Albrecht @_VAlbrecht
111 Followers 126 Following PostDoc @MPI_Biochem in @Labs_Mann | PhD in Biochemistry
Juliette Viodé @JulietteViode
105 Followers 113 Following
Life Science Network @lifesciencenet
21K Followers 19K Following A platform for life sciences. Publications, research protocols, news, events, jobs and more. Sign up at https://t.co/xfb4I8iNYS.
Science HR @sciencehr
9K Followers 7K Following Science Human Resources. A job board and career portal for scientists in academia and industry. #science #career #jobs #postdoc #phd
Patrick W. van Zalm @w_zalm
33 Followers 98 Following Ph.D. student at the Steen lab at Boston Children's Hospital, working on Alzheimer's Disease, biomarkers, proteomics and mass spectrometry.
Kinga Smolen @KingaSmolen
35 Followers 107 Following
X Freeze @XFreeze
233K Followers 2K Following
An-phi Nguyen @phineas_zu
204 Followers 388 Following Lead AI Engineer @biognosys. I like stuff, including ML, DL, Stat, CompBio, and instant noodles.
Winamax Sport 🔞 @WinamaxSport
707K Followers 249 Following ⚠️ AIDE 24h/24 : [email protected] | 🔞 Jeu responsable : https://t.co/CeAeCTdZkH | 👉 Poker : @Winamax
Parks Canada @ParksCanada
231K Followers 431 Following Canada's national historic sites, national parks and national marine conservation areas | Français : @ParcsCanada | Terms: https://t.co/rEnmjPXvhB
Vincent Albrecht @_VAlbrecht
111 Followers 126 Following PostDoc @MPI_Biochem in @Labs_Mann | PhD in Biochemistry
Life Science Network @lifesciencenet
21K Followers 19K Following A platform for life sciences. Publications, research protocols, news, events, jobs and more. Sign up at https://t.co/xfb4I8iNYS.
Immunological Proteom... @ImmPRes_
381 Followers 26 Following ImmPRes is an open access resource for large-scale quantitative mass spectrometry-based proteomics data for immune cell populations. Created by @AJ_Brenes
J. of the American So... @J_ASMS
3K Followers 470 Following A peer-reviewed journal that covers all aspects of mass spectrometry, including fields of scientific inquiry in which mass spectrometry can play a role
Juliette Viodé @JulietteViode
105 Followers 113 Following
Trends Cell Biology @TrendsCellBio
26K Followers 193 Following Trends in Cell Biology is a leading reviews journal covering the latest advances in cell biology. Automatic posting by https://t.co/yxzayn2sCU Blusky handle cp-trendscellbio
Nature Protocols @NatureProtocols
52K Followers 1K Following Nature Protocols is an online resource for authoritative, peer-reviewed protocols.
ProteomicsDB @proteomicsdb
469 Followers 85 Following
CompOmics @compomics
1K Followers 198 Following The CompOmics group specializes in the management, analysis and integration of high-throughput biological data
Mass Dynamics @massDynamicsCo
836 Followers 2K Following Agent-ready omics for fast-moving scientists. Proteomics, metabolomics and transcriptomics, connected and reproducible. Your discoveries compound on us.
Savitski Lab @savitski_lab
2K Followers 501 Following We are the Savitski lab located @embl using and developing stability proteomics methods for assessing the state of the proteome. Migrated to @ savitski-lab.bsky
Science HR @sciencehr
9K Followers 7K Following Science Human Resources. A job board and career portal for scientists in academia and industry. #science #career #jobs #postdoc #phd
Biognosys @biognosys
2K Followers 464 Following Transforming life sciences with cutting-edge #proteomics technology and solutions
Harvard Medical Schoo... @harvardmed
455K Followers 652 Following Official Twitter home of Harvard Medical School, featuring our advances in biomedical research, trends in medical education, and more.
EMBL @embl
67K Followers 910 Following The European Molecular Biology Laboratory drives visionary basic research and technology development in the life sciences. 🦋 https://t.co/r840DbdMXO
Nancy Fliesler @nansonaham
393 Followers 497 Following Strategic science communicator & occasional producer. Tweet own opinion.
jobRxiv @jobRxiv
25K Followers 710 Following The international job board for scientists, by scientists. Are you hiring? ➡️ https://t.co/bgzNHCclCG
Elo Lab @EloLab_fi
339 Followers 40 Following We develop computational data analysis tools and mathematical modelling methods for biomedical research.
Mukesh Kumar, PhD @mukeshbiot
72 Followers 119 Following Principal Scientist @ CST. Proteomics, Mass Spec, Neurodegeneration, mAb, Harvard Medical School, Max Planck Institute of Molecular Cell Biology and Genetics.
BCH Innovation News @BCH_Innovation
5K Followers 2K Following Pediatric science and innovation news | @BostonChildrens | Social Media Disclaimer: https://t.co/rC428MsSck
Molecular Neurodegene... @MolNeuro
3K Followers 678 Following The #1 open-access peer-reviewed neuroscience journal with a 2024 Impact Factor of 17.5 and a 5-year IF of 19.3. Official journal of @_BrightFocus
Nick H @NickHimmelman
6 Followers 11 Following
Nautilus Biotechnolog... @NautilusBio
2K Followers 35 Following Delivering on the Promise of the Human Proteome
Patrick W. van Zalm @w_zalm
33 Followers 98 Following Ph.D. student at the Steen lab at Boston Children's Hospital, working on Alzheimer's Disease, biomarkers, proteomics and mass spectrometry.
Brett Phinney @UCDProteomics
5K Followers 1K Following Director: UC Davis Genome Center Proteomics Core. Analyzer of weird samples . Proteomics Radio Hour crooner. Currently twitterpated
ProteomicsScience @HFazelinia
886 Followers 600 Following Proteomics Core Facility. Children's Hospital of Philadelphia.
PYOFLIFE.COM @Parajulisaroj16
21K Followers 4K Following
Opentrons @opentrons
6K Followers 655 Following Open-source liquid handling robots for scientists https://t.co/orXJPHYhh6
Precision Vaccines Pr... @PrecVaccines
1K Followers 2K Following We are an #international network of #academia, #government & #industry bringing #PrecisionMedicine to #vaccinology. Views are our own.
Shourjo Ghose @Shourjomz
92 Followers 165 Following Resident Mass Spectrometry Guru, a diligent dabbler in Proteomics and a connoisseur of fine acetonitrile
Science in Boston @ScienceinBoston
3K Followers 2K Following Your complete source for life science news and events in the Greater Boston Area. Brought to you by the Science in the City program at @STEMCELLTech.
Kinga Smolen @KingaSmolen
35 Followers 107 Following
Young Proteomics Inve... @EU_YPIC
3K Followers 1K Following We aim to connect and support early career researchers in #proteomics on their path through and beyond academia! Find us also on LinkedIn, Mastodon and Facebook
Am Soc for Mass Spec @asmsnews
8K Followers 2K Following The American Society for Mass Spectrometry was formed in 1969 to promote and disseminate knowledge of mass spectrometry. Members include over 7,500 scientists.
Nature Immunology @NatImmunol
71K Followers 170 Following Nature Immunology is a multidisciplinary journal that publishes papers of the highest quality and significance in all areas of immunology.
CDC @CDCgov
5.5M Followers 245 Following CDC's official source for daily credible health & safety updates from Centers for Disease Control & Prevention. Privacy/comment policy: https://t.co/9LbZmE3Wzg
Florian Krammer @florian_krammer
350K Followers 1K Following Viruses, viruses, viruses and vaccines. V5=3xancestral+1x bivalent+1xXBB Professor at the Department of Microbiology Icahn School of Medicine at Mount Sinai
Evosep @EvosepBio
2K Followers 3K Following Clinical proteomics made 100 times more robust and 10 times faster
Seer @seer_bio
1K Followers 687 Following At Seer, we develop innovative solutions that act as a gateway to the proteome. We develop solutions to enable unbiased, deep, rapid, proteomics at scale.
ReSyn Biosciences @ReSyn_Bio
744 Followers 552 Following Magnetic reagents for improved reproducibility and automation of Mass Spectrometry and Bioseparation workflows.
Thermo Fisher @thermofisher
65K Followers 658 Following Thermo Fisher Scientific Inc. is the world leader in serving science. Our mission is to enable our customers to make the world healthier, cleaner and safer.
Bruker @bruker
16K Followers 9K Following #Bruker Scientific Instruments (NMR, EPR, MRI, microCT, MS, LCMS, MALDI, TOF, MS-TOF, FTMS, XRD, XRF, FTIR, Raman...) Life Sciences, Pharma, Chemical, Food, QC.
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